RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA395690" and tax_phylum = "Candidatus Methylomirabilota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA395690 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15714359 15714359 PRJNA395690_P_NODE_28053_length_167_cov_1.703390_g27901_i0 PRJNA395690 28053 167 1.70339 2.8446613 Candidatus Methylomirabilis oxygeniifera 671143 Bacteria Bacteria 52.8 0.014   NTclustered gi|258590833|emb|FP565575.1| 671143 g27901 i0 100 0.167664670658683 28 0 17 0 73 100 108454 108427 Candidatus Methylomirabilis oxyfera complete genome blastn 28 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia Candidatus Methylomirabilales Candidatus Methylomirabilaceae Candidatus Methylomirabilis Candidatus Methylomirabilis oxygeniifera
27201601 27201601 PRJNA395690_P_NODE_8322_length_280_cov_1.606061_g8170_i0 PRJNA395690 8322 280 1.606061 4.4969708 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 70.9 4.94e-13   NR HYT44289.1 2072417 g8170 i0 46.3 0.857142857142857 80 43 85.7 0 41 280 1 80 HYT44289.1 hypothetical protein [Candidatus Methylomirabilota bacterium] diamond 240 70.9 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
30169976 30169976 PRJNA395690_P_NODE_15132_length_209_cov_1.275000_g14980_i0 PRJNA395690 15132 209 1.275 2.66475 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 81.6 1.21e-17   NR HYT44289.1 2072417 g14980 i0 55.2 0.961722488038278 67 30 96.2 0 208 8 79 145 HYT44289.1 hypothetical protein [Candidatus Methylomirabilota bacterium] diamond 201 81.6 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;