RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA395690", tax_kingdom = "Thermotogati" and tax_phylum = "Synergistota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Synergistota · 2 ✖

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA395690 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
411500 411500 PRJNA395690_P_NODE_15981_length_203_cov_1.714286_g15829_i0 PRJNA395690 15981 203 1.714286 3.48000058 Synergistales bacterium 2268201 Bacteria Bacteria 60.2 1.06e-4   NTclustered gi|2621703689|emb|OY762654.1| 2268201 g15829 i0 100 0.310344827586207 32 0 16 0 109 140 1730186 1730217 MAG: Synergistales bacterium isolate e2a2af2a-30b9-47e3-8e03-f1be080e1666 genome assembly, chromosome: 1 blastn 63 60.2 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales     Synergistales bacterium
32320362 32320362 PRJNA395690_P_NODE_6079_length_326_cov_1.469314_g5929_i0 PRJNA395690 6079 326 1.469314 4.78996364 Synergistaceae bacterium 2053624 Bacteria Bacteria 50.8 1.32e-4   NR MBQ7155063.1 2053624 g5929 i0 32.7 1.50920245398773 101 55 92.9 1 312 10 73 160 MBQ7155063.1 type II secretion system F family protein [Synergistaceae bacterium] diamond 492 50.8 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;