contig_metadata
11 rows where bioproject = "PRJNA395690", tax_kingdom = "Pseudomonadati" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 411470 | 411470 | PRJNA395690_P_NODE_14421_length_214_cov_1.781818_g14269_i0 | PRJNA395690 | 14421 | 214 | 1.781818 | 3.81309052 | Thermodesulfobacteriota bacterium | 2202153 | Bacteria | Bacteria | 209 | 1.06e-49 | NTclustered | gi|2893358420|emb|OZ220712.1| | 2202153 | g14269 | i0 | 85.047 | 264.668224299065 | 214 | 23 | 99 | 8 | 4 | 214 | 1712020 | 1711813 | MAG: Thermodesulfobacteriota bacterium isolate 564989d4-0a31-48dd-8468-51938819ad86 genome assembly, chromosome: 1 | blastn | 56639 | 209 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 411710 | 411710 | PRJNA395690_P_NODE_33641_length_163_cov_0.894737_g33489_i0 | PRJNA395690 | 33641 | 163 | 0.894737 | 1.45842131 | Desulfobulbus oralis | 1986146 | Bacteria | Bacteria | 58.4 | 2.92e-4 | NTclustered | gi|1343450889|gb|CP021255.1| | 1986146 | g33489 | i0 | 80.22 | 1.14110429447853 | 91 | 6 | 91 | 7 | 1 | 85 | 1109050 | 1109134 | Desulfobulbus oralis strain HOT041/ORNL chromosome, complete genome | blastn | 186 | 58.4 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Desulfobulbus | Desulfobulbus oralis | ||
| 7456977 | 7456977 | PRJNA395690_P_NODE_33606_length_163_cov_0.894737_g33454_i0 | PRJNA395690 | 33606 | 163 | 0.894737 | 1.45842131 | Desulfuromonadales | 69541 | Bacteria | Bacteria | 189 | 9.92e-44 | NTclustered | gi|2304895958|gb|CP092109.1| | 2847045 | g33454 | i0 | 88.608 | 169.343558282209 | 158 | 14 | 96 | 4 | 8 | 163 | 1359638 | 1359793 | Geoalkalibacter halelectricus strain SAP-1 chromosome | blastn | 27603 | 189 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Geoalkalibacteraceae | Geoalkalibacter | Geoalkalibacter halelectricus | ||
| 20205281 | 20205281 | PRJNA395690_P_NODE_6476_length_316_cov_2.411985_g6325_i0 | PRJNA395690 | 6476 | 316 | 2.411985 | 7.6218726 | Geobacter | 28231 | Bacteria | Bacteria | 265 | 3.49e-66 | NTclustered | gi|779731694|gb|CP010430.1| | 35554 | g6325 | i0 | 89.524 | 125.351265822785 | 210 | 20 | 66 | 2 | 98 | 306 | 2783611 | 2783403 | Geobacter sulfurreducens strain AM-1 genome | blastn | 39611 | 265 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter sulfurreducens | ||
| 27265079 | 27265079 | PRJNA395690_P_NODE_32683_length_164_cov_0.886957_g32531_i0 | PRJNA395690 | 32683 | 164 | 0.886957 | 1.45460948 | Syntrophaceae bacterium | 2052184 | Bacteria | Bacteria | 97.4 | 5.72e-22 | NR | MEN6472527.1 | 2052184 | g32531 | i0 | 83.3 | 1.97560975609756 | 54 | 9 | 98.8 | 0 | 162 | 1 | 108 | 161 | MEN6472527.1 amidase [Syntrophaceae bacterium] | diamond | 324 | 97.4 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophia | Syntrophales | Syntrophaceae | Syntrophaceae bacterium | |||
| 29081700 | 29081700 | PRJNA395690_P_NODE_34008_length_162_cov_2.345133_g33856_i0 | PRJNA395690 | 34008 | 162 | 2.345133 | 3.79911546 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 78.6 | 2.86e-15 | NR | MCB2226183.1 | 2528248 | g33856 | i0 | 69.8 | 11.6296296296296 | 53 | 16 | 98.1 | 0 | 161 | 3 | 742 | 794 | MCB2226183.1 multidrug efflux RND transporter permease subunit [Desulfarculaceae bacterium] | diamond | 1884 | 78.6 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfarculia | Desulfarculales | Desulfarculaceae | Desulfarculaceae bacterium | |||
| 29176526 | 29176526 | PRJNA395690_P_NODE_6669_length_312_cov_1.346008_g6517_i0 | PRJNA395690 | 6669 | 312 | 1.346008 | 4.19954496 | root | 1 | Root_unresolved | Root_unresolved | 160 | 2.0199999999999998e-46 | NR | WP_207690708.1 | 45656 | g6517 | i0 | 68 | 12.8269230769231 | 103 | 33 | 99 | 0 | 310 | 2 | 68 | 170 | WP_207690708.1 DNA adenine methylase [Desulfonema limicola] | diamond | 4002 | 161 | 0.993788819875776 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfococcaceae | Desulfonema | Desulfonema limicola | ||
| 30345406 | 30345406 | PRJNA395690_P_NODE_12112_length_234_cov_1.405405_g11960_i0 | PRJNA395690 | 12112 | 234 | 1.405405 | 3.2886477 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 71.6 | 9.36e-14 | NR | OGU10987.1 | 1798318 | g11960 | i0 | 73.9 | 3.55128205128205 | 46 | 12 | 59 | 0 | 91 | 228 | 1 | 46 | OGU10987.1 MAG: GxxExxY protein [Geobacteraceae bacterium GWC2_58_44] | diamond | 831 | 71.6 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacteraceae bacterium GWC2_58_44 | |||
| 30391775 | 30391775 | PRJNA395690_P_NODE_29893_length_166_cov_0.871795_g29741_i0 | PRJNA395690 | 29893 | 166 | 0.871795 | 1.4471797 | Smithellaceae bacterium | 2964540 | Bacteria | Bacteria | 59.7 | 4.29e-9 | NR | HOX16423.1 | 2964540 | g29741 | i0 | 73 | 0.668674698795181 | 37 | 10 | 66.9 | 0 | 5 | 115 | 9 | 45 | HOX16423.1 beta-propeller fold lactonase family protein [Smithellaceae bacterium] | diamond | 111 | 59.7 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophia | Syntrophales | Smithellaceae | Smithellaceae bacterium | |||
| 30565713 | 30565713 | PRJNA395690_P_NODE_35013_length_162_cov_0.902655_g34861_i0 | PRJNA395690 | 35013 | 162 | 0.902655 | 1.4623011 | Bacteria | 2 | Bacteria | Bacteria | 65.1 | 1.59e-10 | NR | WP_145023015.1 | 345631 | g34861 | i0 | 60.7 | 12.8518518518519 | 56 | 17 | 98.1 | 2 | 160 | 2 | 396 | 449 | WP_145023015.1 exodeoxyribonuclease V subunit beta [Geobacter argillaceus] | diamond | 2082 | 65.5 | 0.993893129770992 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter argillaceus | ||
| 30801954 | 30801954 | PRJNA395690_P_NODE_15514_length_206_cov_1.891720_g15362_i0 | PRJNA395690 | 15514 | 206 | 1.89172 | 3.8969432 | Geobacter sulfurreducens | 35554 | Bacteria | Bacteria | 40.4 | 0.0441 | NR | WP_235044949.1 | 35554 | g15362 | i0 | 35.6 | 0.859223300970874 | 59 | 36 | 83 | 1 | 182 | 12 | 4 | 62 | WP_235044949.1 hypothetical protein [Geobacter sulfurreducens] | diamond | 177 | 40.4 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter sulfurreducens |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;