RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA395690", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Porifera · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA395690 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13165336 13165336 PRJNA395690_P_NODE_19531_length_188_cov_1.100719_g19379_i0 PRJNA395690 19531 188 1.100719 2.06935172 Sycon ciliatum 27933 Porifera other_Eukaryota 113 7.290000000000001e-21   NTclustered gi|2732928229|ref|XM_065331178.1| 27933 g19379 i0 77.895 8.6436170212766 190 36 99 5 1 187 229 415 PREDICTED: Sycon ciliatum V-type proton ATPase 16 kDa proteolipid subunit c (LOC135817890), mRNA blastn 1625 113 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum
17656733 17656733 PRJNA395690_P_NODE_8474_length_278_cov_1.170306_g8322_i0 PRJNA395690 8474 278 1.170306 3.25345068 Verongiida 1779151 Porifera other_Eukaryota 69.4 2.54e-7   NTclustered gi|2802839310|emb|OZ181693.1| 261677 g8322 i0 84.507 0.600719424460432 71 10 25 1 158 227 3594 3524 Aiolochroia crassa genome assembly, organelle: mitochondrion blastn 167 69.4 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Verongiida Aplysinidae Aiolochroia Aiolochroia crassa
29822398 29822398 PRJNA395690_P_NODE_16431_length_200_cov_1.509934_g16279_i0 PRJNA395690 16431 200 1.509934 3.019868 Oscarella lobularis 121494 Porifera other_Eukaryota 77.8 4.13e-16   NR XP_065838480.1 121494 g16279 i0 53.1 2.835 64 30 96 0 2 193 53 116 XP_065838480.1 large ribosomal subunit protein eL21-like [Oscarella lobularis] diamond 567 77.8 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Oscarellidae Oscarella Oscarella lobularis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;