RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA395690", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA395690 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27802004 27802004 PRJNA395690_P_NODE_19884_length_187_cov_1.246377_g19732_i0 PRJNA395690 19884 187 1.246377 2.33072499 Vittaforma corneae ATCC 5 42399 Fungi Fungi 106 5.12e-25   NR XP_007604535.1 993615 g19732 i0 80 0.962566844919786 60 12 96.3 0 6 185 154 213 XP_007604535.1 uncharacterized protein VICG_01089 [Vittaforma corneae ATCC 50505] diamond 180 106 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae
28117509 28117509 PRJNA395690_P_NODE_35725_length_161_cov_0.910714_g35573_i0 PRJNA395690 35725 161 0.910714 1.46624954 Vittaforma corneae ATCC 5 42399 Fungi Fungi 85.5 1.04e-17   NR XP_007603481.1 993615 g35573 i0 75 0.968944099378882 52 13 96.9 0 2 157 859 910 XP_007603481.1 uncharacterized protein VICG_00028 [Vittaforma corneae ATCC 50505] diamond 156 85.5 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae
29759325 29759325 PRJNA395690_P_NODE_32431_length_164_cov_0.886957_g32279_i0 PRJNA395690 32431 164 0.886957 1.45460948 Vittaforma corneae ATCC 5 42399 Fungi Fungi 52.4 4.06e-7   NR XP_007605096.1 993615 g32279 i0 52.1 0.878048780487805 48 23 87.8 0 148 5 10 57 XP_007605096.1 uncharacterized protein VICG_01651 [Vittaforma corneae ATCC 50505] diamond 144 52.4 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;