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contig_metadata

33 rows where bioproject = "PRJNA395690", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 33 ✖

tax_kingdom 1

  • Bacillati · 33 ✖

bioproject 1

  • PRJNA395690 · 33 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
411727 411727 PRJNA395690_P_NODE_34741_length_162_cov_0.902655_g34589_i0 PRJNA395690 34741 162 0.902655 1.4623011 Caldilineaceae bacterium 2614250 Bacteria Bacteria 78.2 3.91e-15   NR MEZ4683722.1 2614250 g34589 i0 64.2 0.981481481481482 53 18 96.3 1 5 160 1799 1851 MEZ4683722.1 DUF4082 domain-containing protein [Caldilineaceae bacterium] diamond 159 78.2 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
1686340 1686340 PRJNA395690_P_NODE_16542_length_199_cov_4.186667_g16390_i0 PRJNA395690 16542 199 4.186667 8.33146733 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 222 1.24e-53   NTclustered gi|2874253698|emb|OY969424.1| 1672391 g16390 i0 87.755 73.3668341708543 196 16 96 7 1 191 970606 970414 MAG: uncultured Chloroflexia bacterium isolate MFD06229.bin.c.1 genome assembly, chromosome: 1 blastn 14600 222 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
5515508 5515508 PRJNA395690_P_NODE_37205_length_152_cov_6.291262_g37052_i0 PRJNA395690 37205 152 6.291262 9.56271824 Anaerolineales bacterium 2073117 Bacteria Bacteria 222 8.95e-54   NTclustered gi|2621701347|emb|OY760067.1| 2073117 g37052 i0 96.296 327.578947368421 135 5 89 0 16 150 898100 897966 MAG: Anaerolineales bacterium isolate e1712b75-d4f6-4c5e-bc49-bbfdc0d5b476 genome assembly, chromosome: 2 blastn 49792 222 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
11890346 11890346 PRJNA395690_P_NODE_14270_length_215_cov_1.698795_g14118_i0 PRJNA395690 14270 215 1.698795 3.65240925 Chloroflexota bacterium 2026724 Bacteria Bacteria 239 1.36e-58   NTclustered gi|1985684846|gb|CP069394.1| 2026724 g14118 i0 89.062 6.91627906976744 192 21 89 0 24 215 1474158 1473967 Chloroflexi bacterium strain ZRK35 chromosome, complete genome blastn 1487 239 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
11890465 11890465 PRJNA395690_P_NODE_23730_length_178_cov_0.945736_g23578_i0 PRJNA395690 23730 178 0.945736 1.68341008 Roseiflexus sp. RS-1 357808 Bacteria Bacteria 209 8.44e-50   NTclustered gi|470481958|ref|NR_076505.1| 357808 g23578 i0 92 7.23033707865169 150 10 84 2 9 157 1250 1398 Roseiflexus sp. RS-1 strain RS-1 23S ribosomal RNA, complete sequence blastn 1287 209 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Roseiflexaceae Roseiflexus Roseiflexus sp. RS-1
11890583 11890583 PRJNA395690_P_NODE_33890_length_163_cov_0.894737_g33738_i0 PRJNA395690 33890 163 0.894737 1.45842131 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 231 1.63e-56   NTclustered gi|2874254102|emb|OY970185.1| 1672391 g33738 i0 92.169 24.5337423312883 166 9 100 3 1 163 1858847 1858683 MAG: uncultured Chloroflexia bacterium isolate MFD06435.bin.c.3 genome assembly, chromosome: 1 blastn 3999 231 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
19537455 19537455 PRJNA395690_P_NODE_21076_length_184_cov_1.481481_g20924_i0 PRJNA395690 21076 184 1.481481 2.72592504 Anaerolineales bacterium 2073117 Bacteria Bacteria 67.6 5.6e-7   NTclustered gi|2556906889|gb|CP129483.1| 2073117 g20924 i0 82.895 46.5108695652174 76 12 41 1 27 101 2030671 2030596 MAG: Anaerolineales bacterium isolate cMAG.13 chromosome, complete genome blastn 8558 67.6 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
20813463 20813463 PRJNA395690_P_NODE_6417_length_317_cov_3.582090_g6266_i0 PRJNA395690 6417 317 3.58209 11.3552253 Phototrophicaceae bacterium 3069543 Bacteria Bacteria 172 2.18e-38   NTclustered gi|2893356046|emb|OZ220469.1| 3069543 g6266 i0 80.417 411.794952681388 240 35 76 9 70 309 2203535 2203762 MAG: Phototrophicaceae bacterium isolate 149760b3-584d-4ebc-81cd-1236e649b30c genome assembly, chromosome: 1 blastn 130539 172 1 Bacteria   Bacillati Chloroflexota Candidatus Thermofontia Phototrophicales Phototrophicaceae   Phototrophicaceae bacterium
23363693 23363693 PRJNA395690_P_NODE_21339_length_183_cov_1.925373_g21187_i0 PRJNA395690 21339 183 1.925373 3.52343259 uncultured Dehalococcoidia bacterium 498747 Bacteria Bacteria 52.8 0.016   NTclustered gi|2531963199|emb|OY282442.1| 498747 g21187 i0 92.105 0.207650273224044 38 2 20 1 49 85 1397452 1397489 MAG: uncultured Dehalococcoidia bacterium genome assembly, chromosome: 1 blastn 38 52.8 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       uncultured Dehalococcoidia bacterium
26632187 26632187 PRJNA395690_P_NODE_22001_length_182_cov_1.210526_g21849_i0 PRJNA395690 22001 182 1.210526 2.20315732 Ktedonobacteraceae bacterium 2740538 Bacteria Bacteria 82 2.33e-16   NR MFL5628388.1 2740538 g21849 i0 61 0.972527472527473 59 23 97.3 0 1 177 74 132 MFL5628388.1 P-loop NTPase fold protein [Ktedonobacteraceae bacterium] diamond 177 82 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria Ktedonobacterales Ktedonobacteraceae   Ktedonobacteraceae bacterium
26822329 26822329 PRJNA395690_P_NODE_13441_length_222_cov_1.306358_g13289_i0 PRJNA395690 13441 222 1.306358 2.90011476 Chloroflexota bacterium 2026724 Bacteria Bacteria 98.6 6.2e-22   NR MEA3349772.1 2026724 g13289 i0 71.2 4.72972972972973 66 18 89.2 1 221 24 187 251 MEA3349772.1 type I restriction endonuclease subunit R [Chloroflexota bacterium] diamond 1050 98.6 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
26854091 26854091 PRJNA395690_P_NODE_4781_length_363_cov_2.308917_g4632_i0 PRJNA395690 4781 363 2.308917 8.38136871 Dehalococcoidales bacterium 2026733 Bacteria Bacteria 97.1 5.709999999999999e-23   NR MDO9333994.1 2026733 g4632 i0 92.6 0.446280991735537 54 3 43.8 1 361 203 86 139 MDO9333994.1 30S ribosomal protein S4 [Dehalococcoidales bacterium] diamond 162 97.1 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia Dehalococcoidales     Dehalococcoidales bacterium
27629387 27629387 PRJNA395690_P_NODE_17024_length_197_cov_1.033784_g16872_i0 PRJNA395690 17024 197 1.033784 2.03655448 PVC group 1783257 Bacteria Bacteria 57.4 1.31e-7   NR KAB2902485.1 2052143 g16872 i0 44.6 2.83248730964467 65 35 97.5 1 195 4 153 217 KAB2902485.1 MAG: 4Fe-4S dicluster domain-containing protein [Anaerolineae bacterium] diamond 558 57.4 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
27864911 27864911 PRJNA395690_P_NODE_9725_length_261_cov_0.962264_g9573_i0 PRJNA395690 9725 261 0.962264 2.51150904 Anaerolineae bacterium 2052143 Bacteria Bacteria 119 1.06e-29   NR MCI0609469.1 2052143 g9573 i0 64.3 1.93103448275862 84 30 96.6 0 9 260 333 416 MCI0609469.1 serine/threonine protein kinase [Anaerolineae bacterium] diamond 504 119 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
28591310 28591310 PRJNA395690_P_NODE_14667_length_212_cov_1.883436_g14515_i0 PRJNA395690 14667 212 1.883436 3.99288432 Herpetosiphonaceae bacterium 2720503 Bacteria Bacteria 50.1 7.05e-6   NR HEY0602865.1 2720503 g14515 i0 43.3 0.849056603773585 60 32 84.9 1 1 180 31 88 HEY0602865.1 hypothetical protein [Herpetosiphonaceae bacterium] diamond 180 50.1 1 Bacteria   Bacillati Chloroflexota Chloroflexia Herpetosiphonales Herpetosiphonaceae   Herpetosiphonaceae bacterium
28955560 28955560 PRJNA395690_P_NODE_10928_length_246_cov_1.796954_g10776_i0 PRJNA395690 10928 246 1.796954 4.42050684 Bacteria 2 Bacteria Bacteria 138 1.13e-39   NR HQF62488.1 2024896 g10776 i0 82.5 1.96341463414634 80 14 97.6 0 242 3 27 106 HQF62488.1 GNAT family N-acetyltransferase [Anaerolineaceae bacterium] diamond 483 139 0.992805755395683 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium
28955564 28955564 PRJNA395690_P_NODE_30628_length_165_cov_1.344828_g30476_i0 PRJNA395690 30628 165 1.344828 2.2189662 Bacillati 1783272 Bacteria Bacteria 51.2 1.28e-5   NR MDO9333450.1 2026733 g30476 i0 50 3.69090909090909 46 23 83.6 0 155 18 137 182 MDO9333450.1 hypothetical protein [Dehalococcoidales bacterium] diamond 609 51.6 0.992248062015504 Bacteria   Bacillati Chloroflexota Dehalococcoidia Dehalococcoidales     Dehalococcoidales bacterium
29712703 29712703 PRJNA395690_P_NODE_27110_length_169_cov_2.216667_g26958_i0 PRJNA395690 27110 169 2.216667 3.74616723 Bacillati 1783272 Bacteria Bacteria 41.2 0.0496   NR MDP9468077.1 2026724 g26958 i0 34.7 1.56213017751479 49 32 87 0 17 163 347 395 MDP9468077.1 fibronectin type III domain-containing protein [Chloroflexota bacterium] diamond 264 41.6 0.990384615384615 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30297008 30297008 PRJNA395690_P_NODE_30232_length_166_cov_0.871795_g30080_i0 PRJNA395690 30232 166 0.871795 1.4471797 Candidatus Limnocylindria bacterium 3047546 Bacteria Bacteria 55.5 4.34e-7   NR HTI69015.1 3047546 g30080 i0 55.6 0.813253012048193 45 20 81.3 0 165 31 1084 1128 HTI69015.1 glycosyltransferase [Candidatus Limnocylindria bacterium] diamond 135 55.5 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria       Candidatus Limnocylindria bacterium
30391771 30391771 PRJNA395690_P_NODE_24193_length_176_cov_2.385827_g24041_i0 PRJNA395690 24193 176 2.385827 4.19905552 Ktedonobacteraceae bacterium 2740538 Bacteria Bacteria 50.4 2.85e-5   NR HYX51268.1 2740538 g24041 i0 57.8 0.767045454545455 45 19 76.7 0 170 36 268 312 HYX51268.1 hypothetical protein [Ktedonobacteraceae bacterium] diamond 135 50.4 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria Ktedonobacterales Ktedonobacteraceae   Ktedonobacteraceae bacterium
30423268 30423268 PRJNA395690_P_NODE_32253_length_164_cov_0.886957_g32101_i0 PRJNA395690 32253 164 0.886957 1.45460948 Anaerolineae bacterium 2052143 Bacteria Bacteria 82.4 1.32e-16   NR MBZ0281104.1 2052143 g32101 i0 70.4 5.89024390243902 54 16 98.8 0 1 162 599 652 MBZ0281104.1 replicative DNA helicase [Anaerolineae bacterium] diamond 966 82.4 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
30612322 30612322 PRJNA395690_P_NODE_17313_length_195_cov_1.047945_g17161_i0 PRJNA395690 17313 195 1.047945 2.04349275 Chloroflexota bacterium 2026724 Bacteria Bacteria 47 5.96e-4   NR MDZ4764372.1 2026724 g17161 i0 43.1 0.784615384615385 51 28 78.5 1 33 185 73 122 MDZ4764372.1 hypothetical protein [Chloroflexota bacterium] diamond 153 47 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30897001 30897001 PRJNA395690_P_NODE_13414_length_222_cov_1.751445_g13262_i0 PRJNA395690 13414 222 1.751445 3.8882079 Chloroflexota bacterium 2026724 Bacteria Bacteria 50.8 3.66e-5   NR MDP9315401.1 2026724 g13262 i0 76.5 0.459459459459459 34 4 41.9 2 25 117 1 33 MDP9315401.1 hypothetical protein [Chloroflexota bacterium] diamond 102 50.8 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30991720 30991720 PRJNA395690_P_NODE_10114_length_256_cov_0.985507_g9962_i0 PRJNA395690 10114 256 0.985507 2.52289792 Chloroflexota bacterium 2026724 Bacteria Bacteria 58.9 6.17e-8   NR MBU6334816.1 2026724 g9962 i0 38.1 0.984375 84 50 97.3 2 254 6 87 169 MBU6334816.1 ATP-binding protein [Chloroflexota bacterium] diamond 252 58.9 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31149153 31149153 PRJNA395690_P_NODE_15915_length_204_cov_0.987097_g15763_i0 PRJNA395690 15915 204 0.987097 2.01367788 Leptolinea sp. 2699749 Bacteria Bacteria 52.4 8.73e-6   NR NMB54540.1 2699749 g15763 i0 38.8 0.985294117647059 67 40 97.1 1 6 203 357 423 NMB54540.1 hypothetical protein [Leptolinea sp.] diamond 201 52.4 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae Leptolinea Leptolinea sp.
31560915 31560915 PRJNA395690_P_NODE_27176_length_169_cov_1.700000_g27024_i0 PRJNA395690 27176 169 1.7 2.873 Chloroflexota bacterium 2026724 Bacteria Bacteria 62.4 9.63e-10   NR MDP9315403.1 2026724 g27024 i0 70.3 0.656804733727811 37 11 65.7 0 57 167 1 37 MDP9315403.1 KAP family NTPase [Chloroflexota bacterium] diamond 111 62.4 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31592531 31592531 PRJNA395690_P_NODE_9296_length_267_cov_1.169725_g9144_i0 PRJNA395690 9296 267 1.169725 3.12316575 Anaerolineae bacterium 2052143 Bacteria Bacteria 55.8 1.17e-6   NR MEZ4669224.1 2052143 g9144 i0 60 0.449438202247191 40 16 44.9 0 3 122 287 326 MEZ4669224.1 TIR domain-containing protein [Anaerolineae bacterium] diamond 120 55.8 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
32020399 32020399 PRJNA395690_P_NODE_14798_length_211_cov_2.185185_g14646_i0 PRJNA395690 14798 211 2.185185 4.61074035 Bacteria 2 Bacteria Bacteria 42.4 0.0335   NR MFC1977348.1 2026724 g14646 i0 33.8 2.95734597156398 68 36 96.7 1 205 2 60 118 MFC1977348.1 hypothetical protein [Chloroflexota bacterium] diamond 624 42.7 0.992974238875878 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
32225157 32225157 PRJNA395690_P_NODE_22438_length_181_cov_1.159091_g22286_i0 PRJNA395690 22438 181 1.159091 2.09795471 Anaerolineales bacterium 2073117 Bacteria Bacteria 55.8 3.89e-7   NR HNT26352.1 2073117 g22286 i0 54.2 1.60773480662983 48 21 77.9 1 150 10 491 538 HNT26352.1 peptidoglycan DD-metalloendopeptidase family protein [Anaerolineales bacterium] diamond 291 55.8 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
32320336 32320336 PRJNA395690_P_NODE_20779_length_185_cov_1.125000_g20627_i0 PRJNA395690 20779 185 1.125 2.08125 Chloroflexota bacterium 2026724 Bacteria Bacteria 42 0.0238   NR GIR91464.1 2026724 g20627 i0 40.9 1.07027027027027 66 27 95.7 3 1 177 68 128 GIR91464.1 MAG: hypothetical protein CM15mP91_2340 [Chloroflexota bacterium] diamond 198 42 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
32510106 32510106 PRJNA395690_P_NODE_1979_length_553_cov_1.861111_g1832_i0 PRJNA395690 1979 553 1.861111 10.29194383 Leptolinea sp. HRD-7 2830982 Bacteria Bacteria 128 6.66e-31   NR BCY17325.1 2830982 g1832 i0 43.4 1.65461121157324 152 86 82.5 0 7 462 196 347 BCY17325.1 hypothetical protein hrd7_11740 [Leptolinea sp. HRD-7] diamond 915 128 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae Leptolinea Leptolinea sp. HRD-7
32698937 32698937 PRJNA395690_P_NODE_7940_length_287_cov_1.071429_g7788_i0 PRJNA395690 7940 287 1.071429 3.07500123 Anaerolineae bacterium 2052143 Bacteria Bacteria 99 1.0100000000000002e-21   NR KAB2902484.1 2052143 g7788 i0 68.4 1.58885017421603 76 23 79.4 1 230 3 1 75 KAB2902484.1 MAG: hypothetical protein F9K27_16705 [Anaerolineae bacterium] diamond 456 99 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
32730610 32730610 PRJNA395690_P_NODE_36800_length_156_cov_3.373832_g36647_i0 PRJNA395690 36800 156 3.373832 5.26317792 Chloroflexota bacterium 2026724 Bacteria Bacteria 42.7 0.0112   NR TMB82660.1 2026724 g36647 i0 41.7 4.03846153846154 48 28 92.3 0 155 12 90 137 TMB82660.1 MAG: class I SAM-dependent DNA methyltransferase, partial [Chloroflexota bacterium] diamond 630 42.7 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;