RNAquarium Metadata Server
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contig_metadata

11 rows where bioproject = "PRJNA395690", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 11 ✖

tax_kingdom 1

  • Bacillati · 11 ✖

bioproject 1

  • PRJNA395690 · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5515177 5515177 PRJNA395690_P_NODE_11125_length_244_cov_1.446154_g10973_i0 PRJNA395690 11125 244 1.446154 3.52861576 Capsulimonas corticalis 2219043 Bacteria Bacteria 254 5.62e-63   NTclustered gi|2240447379|dbj|AP025739.1| 2219043 g10973 i0 86.695 538.368852459016 233 25 94 6 15 244 592666 592895 Capsulimonas corticalis AX-7 DNA, complete genome blastn 131362 254 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales Capsulimonadaceae Capsulimonas Capsulimonas corticalis
7456848 7456848 PRJNA395690_P_NODE_14106_length_217_cov_0.910714_g13954_i0 PRJNA395690 14106 217 0.910714 1.97624938 Bacteria 2 Bacteria Bacteria 198 2.3299999999999997e-46   NTclustered gi|1199098093|gb|CP021423.1| 2004467 g13954 i0 84.36 29.7373271889401 211 24 95 6 1 206 1550684 1550890 Armatimonadetes bacterium Uphvl-Ar1 genome blastn 6453 198 1 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium Uphvl-Ar1
10615747 10615747 PRJNA395690_P_NODE_8009_length_285_cov_3.788136_g7857_i0 PRJNA395690 8009 285 3.788136 10.7961876 uncultured Armatimonadetes bacterium 157466 Bacteria Bacteria 279 1.11e-70   NTclustered gi|2874254000|emb|OY970325.1| 157466 g7857 i0 85.556 357.870175438597 270 36 94 3 19 285 1304760 1304491 MAG: uncultured Armatimonadetes bacterium isolate MFD05942.bin.1.84 genome assembly, chromosome: 1 blastn 101993 279 1 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium
12557737 12557737 PRJNA395690_P_NODE_30830_length_165_cov_0.879310_g30678_i0 PRJNA395690 30830 165 0.87931 1.4508615 Fimbriimonas 1005038 Bacteria Bacteria 241 2.74e-59   NTclustered gi|663071213|gb|CP007139.1| 661478 g30678 i0 93.252 453.709090909091 163 11 99 0 1 163 28604 28766 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 74862 241 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
21480812 21480812 PRJNA395690_P_NODE_9537_length_263_cov_1.654206_g9385_i0 PRJNA395690 9537 263 1.654206 4.35056178 Fimbriimonas 1005038 Bacteria Bacteria 355 1.63e-93   NTclustered gi|663071213|gb|CP007139.1| 661478 g9385 i0 91.288 332.467680608365 264 18 99 4 1 262 28511 28251 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 87439 355 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
27991479 27991479 PRJNA395690_P_NODE_30825_length_165_cov_0.879310_g30673_i0 PRJNA395690 30825 165 0.87931 1.4508615 Armatimonadota bacterium 2033014 Bacteria Bacteria 75.5 1.53e-14   NR MES2462291.1 2033014 g30673 i0 74.5 0.927272727272727 51 13 92.7 0 9 161 167 217 MES2462291.1 pirin family protein [Armatimonadota bacterium] diamond 153 75.5 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28149313 28149313 PRJNA395690_P_NODE_17425_length_194_cov_1.662069_g17273_i0 PRJNA395690 17425 194 1.662069 3.22441386 Armatimonadota bacterium 2033014 Bacteria Bacteria 78.2 4.53e-16   NR MER3462571.1 2033014 g17273 i0 54 0.974226804123711 63 29 97.4 0 4 192 22 84 MER3462571.1 hypothetical protein [Armatimonadota bacterium] diamond 189 78.2 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28149327 28149327 PRJNA395690_P_NODE_35525_length_161_cov_1.366071_g35373_i0 PRJNA395690 35525 161 1.366071 2.19937431 Armatimonadota bacterium 2033014 Bacteria Bacteria 59.3 5.37e-9   NR MER3462571.1 2033014 g35373 i0 66.7 2.21739130434783 39 13 72.7 0 16 132 142 180 MER3462571.1 hypothetical protein [Armatimonadota bacterium] diamond 357 59.3 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29885970 29885970 PRJNA395690_P_NODE_2491_length_495_cov_2.013453_g2343_i0 PRJNA395690 2491 495 2.013453 9.96659235 Armatimonadota bacterium 2033014 Bacteria Bacteria 117 1.81e-29   NR MBI3945553.1 2033014 g2343 i0 41.4 0.951515151515152 157 92 95.2 0 475 5 41 197 MBI3945553.1 hypothetical protein [Armatimonadota bacterium] diamond 471 117 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31149180 31149180 PRJNA395690_P_NODE_5175_length_350_cov_1.342193_g5026_i0 PRJNA395690 5175 350 1.342193 4.6976755 Armatimonadota bacterium 2033014 Bacteria Bacteria 46.6 0.00519   NR MCH8979472.1 2033014 g5026 i0 39.7 0.625714285714286 73 34 54 1 242 54 80 152 MCH8979472.1 NADH-quinone oxidoreductase subunit H [Armatimonadota bacterium] diamond 219 46.6 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31275981 31275981 PRJNA395690_P_NODE_13695_length_220_cov_1.192982_g13543_i0 PRJNA395690 13695 220 1.192982 2.6245604 Capsulimonas corticalis 2219043 Bacteria Bacteria 74.3 1.6e-13   NR WP_119322789.1 2219043 g13543 i0 65.5 4.8 58 19 77.7 1 2 172 300 357 WP_119322789.1 WGR domain-containing protein [Capsulimonas corticalis] diamond 1056 74.3 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales Capsulimonadaceae Capsulimonas Capsulimonas corticalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;