RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA395690", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA395690 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26790627 26790627 PRJNA395690_P_NODE_20101_length_186_cov_1.897810_g19949_i0 PRJNA395690 20101 186 1.89781 3.5299266 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 47 5.54e-4   NR ETO34941.1 46433 g19949 i0 37.3 1.08064516129032 67 36 98.4 1 185 3 264 330 ETO34941.1 hypothetical protein RFI_02132 [Reticulomyxa filosa] diamond 201 47 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
31750364 31750364 PRJNA395690_P_NODE_35897_length_161_cov_0.910714_g35745_i0 PRJNA395690 35897 161 0.910714 1.46624954 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 60.1 9.23e-9   NR ETO10925.1 46433 g35745 i0 75 0.745341614906832 40 10 74.5 0 120 1 493 532 ETO10925.1 hypothetical protein RFI_26453 [Reticulomyxa filosa] diamond 120 60.1 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;