RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA395690", tax_clade = "PVC group" and tax_phylum = "Lentisphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA395690 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26997047 26997047 PRJNA395690_P_NODE_26822_length_170_cov_1.685950_g26670_i0 PRJNA395690 26822 170 1.68595 2.866115 Pseudomonadati 3379134 Bacteria Bacteria 57.4 9.15e-8   NR MFA5206050.1 2053569 g26670 i0 49.1 1.58823529411765 55 27 95.3 1 3 164 290 344 MFA5206050.1 MlaD family protein [Lentisphaeria bacterium] diamond 270 57.4 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
31703975 31703975 PRJNA395690_P_NODE_21857_length_182_cov_1.511278_g21705_i0 PRJNA395690 21857 182 1.511278 2.75052596 PVC group 1783257 Bacteria Bacteria 70.5 2.7e-12   NR RMD78441.1 1932692 g21705 i0 63 27.8241758241758 54 20 89 0 19 180 385 438 RMD78441.1 MAG: molecular chaperone DnaK [Lentisphaerota bacterium] diamond 5064 70.5 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;