RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA395690", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA395690 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27991476 27991476 PRJNA395690_P_NODE_29405_length_166_cov_1.307692_g29253_i0 PRJNA395690 29405 166 1.307692 2.17076872 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 50.4 2.43e-5   NR MCX6152562.1 2447898 g29253 i0 50 0.939759036144578 52 24 90.4 1 9 158 523 574 MCX6152562.1 hypothetical protein [Candidatus Kapaibacterium sp.] diamond 156 50.4 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
32446796 32446796 PRJNA395690_P_NODE_33199_length_163_cov_0.894737_g33047_i0 PRJNA395690 33199 163 0.894737 1.45842131 Candidatus Kapaibacterium thiocyanatum 1895771 Bacteria Bacteria 102 1.5899999999999995e-23   NR MBN9398710.1 1895771 g33047 i0 90.6 0.975460122699387 53 5 97.5 0 3 161 565 617 MBN9398710.1 type 2 lantipeptide synthetase LanM [Candidatus Kapaibacterium thiocyanatum] diamond 159 102 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium thiocyanatum
32635806 32635806 PRJNA395690_P_NODE_10380_length_253_cov_1.000000_g10228_i0 PRJNA395690 10380 253 1 2.53 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 52 2.35e-5   NR MCX6152562.1 2447898 g10228 i0 43.3 0.711462450592885 60 31 67.6 1 180 10 180 239 MCX6152562.1 hypothetical protein [Candidatus Kapaibacterium sp.] diamond 180 52 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;