RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA395690", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA395690 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26948715 26948715 PRJNA395690_P_NODE_6382_length_318_cov_2.126394_g6231_i0 PRJNA395690 6382 318 2.126394 6.76193292 Minisyncoccota bacterium 2053589 Bacteria Bacteria 148 3.4399999999999993e-43   NR MDR3570669.1 2053589 g6231 i0 93.7 0.745283018867924 79 5 74.5 0 5 241 35 113 MDR3570669.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 237 148 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30091946 30091946 PRJNA395690_P_NODE_15332_length_207_cov_2.582278_g15180_i0 PRJNA395690 15332 207 2.582278 5.34531546 Pseudomonadati 3379134 Bacteria Bacteria 98.2 5.86e-22   NR HQM18825.1 2053589 g15180 i0 68.8 1.8695652173913 64 20 92.8 0 196 5 414 477 HQM18825.1 DUF4942 domain-containing protein [Candidatus Paceibacterota bacterium] diamond 387 98.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;