RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA393181" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA393181 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29727578 29727578 PRJNA393181_S_NODE_27670_length_215_cov_3.168539_g27564_i0 PRJNA393181 27670 215 3.168539 6.81235885 Candidatus Hydrogenedentales bacterium 3120109 Bacteria Bacteria 51.2 1.87e-5   NR MFA6245259.1 3120109 g27564 i0 39.7 0.87906976744186 63 38 87.9 0 3 191 160 222 MFA6245259.1 hypothetical protein [Candidatus Hydrogenedentales bacterium] diamond 189 51.2 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota Candidatus Hydrogenedentia Candidatus Hydrogenedentales     Candidatus Hydrogenedentales bacterium
31640669 31640669 PRJNA393181_S_NODE_2756_length_630_cov_3.025295_g2674_i0 PRJNA393181 2756 630 3.025295 19.0593585 Pseudomonadati 3379134 Bacteria Bacteria 140 2.76e-34   NR HQH54014.1 2030809 g2674 i0 35.1 3.01428571428571 211 136 100 1 630 1 552 762 HQH54014.1 Hsp70 family protein [Candidatus Hydrogenedentota bacterium] diamond 1899 140 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;