RNAquarium Metadata Server
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contig_metadata

14 rows where bioproject = "PRJNA393181" and tax_phylum = "Arthropoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 14 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA393181 · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2353875 2353875 PRJNA393181_S_NODE_29062_length_209_cov_2.406977_g28956_i0 PRJNA393181 29062 209 2.406977 5.03058193 root 1 Root_unresolved Root_unresolved 63.9 8.46e-6   NTclustered gi|2488167516|emb|OC981260.1| 77745 g28956 i0 100 17.4401913875598 34 0 16 0 176 209 55 22 Chydorus sphaericus partial EOG090X09DZ gene for EOG090X09DZ blastn 3645 63.9 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Diplostraca Chydoridae Chydorus Chydorus sphaericus
2960738 2960738 PRJNA393181_S_NODE_11083_length_362_cov_4.800000_g10977_i0 PRJNA393181 11083 362 4.8 17.376 Chelidurella thaleri 2546182 Arthropoda Arthropoda 52.8 0.034   NTclustered gi|2919610158|emb|OZ238415.1| 2546182 g10977 i0 100 0.0773480662983425 28 0 8 0 300 327 2961648 2961675 Chelidura thaleri genome assembly, chromosome: 16 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Dermaptera Forficulidae Chelidurella Chelidurella thaleri
4237756 4237756 PRJNA393181_S_NODE_37564_length_176_cov_2.805755_g37458_i0 PRJNA393181 37564 176 2.805755 4.9381288 Timema douglasi 61478 Arthropoda Arthropoda 270 3.77e-68   NTclustered gi|1936766486|emb|OA594500.1| 61478 g37458 i0 94.886 1 176 3 100 2 1 176 1598 1429 1_Tdi_b3v08 blastn 176 270 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Phasmatodea Timematidae Timema Timema douglasi
6788816 6788816 PRJNA393181_S_NODE_9286_length_395_cov_26.025140_g9180_i0 PRJNA393181 9286 395 26.02514 102.799303 Mythimna separata 271217 Arthropoda Arthropoda 54.7 0.011   NTclustered gi|443609450|dbj|AB778567.1| 271217 g9180 i0 100 0.144303797468354 29 0 7 0 10 38 53 81 Mythimna separata PsIAP mRNA for inhibitor of apoptosis protein, complete cds blastn 57 54.7 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Lepidoptera Noctuidae Mythimna Mythimna separata
10614608 10614608 PRJNA393181_S_NODE_40349_length_168_cov_1.977099_g40243_i0 PRJNA393181 40349 168 1.977099 3.32152632 Callophrys avis 700180 Arthropoda Arthropoda 52.8 0.014   NTclustered gi|2918385993|emb|OZ238089.1| 700180 g40243 i0 100 0.166666666666667 28 0 17 0 133 160 11333872 11333899 Callophrys avis genome assembly, chromosome: 22 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Lepidoptera Lycaenidae Callophrys Callophrys avis
11889718 11889718 PRJNA393181_S_NODE_4510_length_532_cov_2.157576_g4406_i0 PRJNA393181 4510 532 2.157576 11.47830432 Anarta stigmosa 1869462 Arthropoda Arthropoda 54.7 0.015   NTclustered gi|2918376569|emb|OZ237994.1| 1869462 g4406 i0 96.875 0.0601503759398496 32 1 6 0 136 167 766035 766004 Anarta stigmosa genome assembly, chromosome: 18 blastn 32 54.7 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Lepidoptera Noctuidae Anarta Anarta stigmosa
13832080 13832080 PRJNA393181_S_NODE_41531_length_165_cov_1.218750_g41425_i0 PRJNA393181 41531 165 1.21875 2.0109375 Metazoa 33208 Arthropoda Arthropoda 56.5 0.001   NTclustered gi|2867932872|ref|XM_015171214.3| 7244 g41425 i0 100 2.5030303030303 30 0 18 0 136 165 1050 1021 PREDICTED: Drosophila virilis Dorsal switch protein 1 (Dsp1), transcript variant X2, mRNA blastn 413 56.5 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Drosophilidae Drosophila Drosophila virilis
15713688 15713688 PRJNA393181_S_NODE_6313_length_467_cov_9.806977_g6207_i0 PRJNA393181 6313 467 9.806977 45.79858259 Mythimna separata 271217 Arthropoda Arthropoda 54.7 0.013   NTclustered gi|443609450|dbj|AB778567.1| 271217 g6207 i0 100 0.0620985010706638 29 0 6 0 430 458 81 53 Mythimna separata PsIAP mRNA for inhibitor of apoptosis protein, complete cds blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Lepidoptera Noctuidae Mythimna Mythimna separata
16988249 16988249 PRJNA393181_S_NODE_41914_length_164_cov_1.228346_g41808_i0 PRJNA393181 41914 164 1.228346 2.01448744 Medioppia subpectinata 1979941 Arthropoda Arthropoda 52.8 0.014   NTclustered gi|1964708817|emb|OC858617.1| 1979941 g41808 i0 100 0.170731707317073 28 0 17 0 60 87 5040 5067 Medioppia subpectinata blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Sarcoptiformes Oppiidae Medioppia Medioppia subpectinata
20811948 20811948 PRJNA393181_S_NODE_22277_length_247_cov_2.247619_g22171_i0 PRJNA393181 22277 247 2.247619 5.55161893 Timema douglasi 61478 Arthropoda Arthropoda 435 1.9e-117   NTclustered gi|1936766486|emb|OA594500.1| 61478 g22171 i0 98.381 1 247 4 100 0 1 247 1869 1623 1_Tdi_b3v08 blastn 247 435 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Phasmatodea Timematidae Timema Timema douglasi
20812271 20812271 PRJNA393181_S_NODE_35277_length_184_cov_1.850340_g35171_i0 PRJNA393181 35277 184 1.85034 3.4046256 root 1 Root_unresolved Root_unresolved 57 1.59e-7   NR VVC97936.1 189913 g35171 i0 69 11.0217391304348 42 12 68.5 1 126 1 92 132 VVC97936.1 unnamed protein product [Leptidea sinapis] diamond 2028 57 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Lepidoptera Pieridae Leptidea Leptidea sinapis
23362387 23362387 PRJNA393181_S_NODE_20679_length_258_cov_2.457014_g20573_i0 PRJNA393181 20679 258 2.457014 6.33909612 Maniola hyperantus 2795564 Arthropoda Arthropoda 54.7 0.007   NTclustered gi|2839044039|ref|XM_034974608.2| 2795564 g20573 i0 100 0.449612403100775 29 0 11 0 161 189 886 914 PREDICTED: Maniola hyperantus transmembrane protein 94-like protein l(2)k05819 (l(2)k05819), transcript variant X1, mRNA blastn 116 54.7 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Lepidoptera Nymphalidae Maniola Maniola hyperantus
30896957 30896957 PRJNA393181_S_NODE_18574_length_275_cov_2.457983_g18468_i0 PRJNA393181 18574 275 2.457983 6.75945325 Polyplax serrata 468196 Arthropoda Arthropoda 64.7 4.56e-10   NR KAK6619586.1 468196 g18468 i0 75 0.698181818181818 32 8 34.9 0 3 98 183 214 KAK6619586.1 hypothetical protein RUM43_012343 [Polyplax serrata] diamond 192 64.7 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Psocodea Polyplacidae Polyplax Polyplax serrata
31592470 31592470 PRJNA393181_S_NODE_34216_length_188_cov_1.291391_g34110_i0 PRJNA393181 34216 188 1.291391 2.42781508 Clunio marinus 568069 Arthropoda Arthropoda 116 1.04e-29   NR CRL02559.1 568069 g34110 i0 85.5 0.98936170212766 62 9 98.9 0 186 1 251 312 CRL02559.1 CLUMA_CG015843, isoform A [Clunio marinus] diamond 186 116 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Chironomidae Clunio Clunio marinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;