contig_metadata
11 rows where bioproject = "PRJNA393181", tax_kingdom = "Pseudomonadati" and tax_phylum = "Thermomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2961759 | 2961759 | PRJNA393181_S_NODE_8583_length_409_cov_2.849462_g8477_i0 | PRJNA393181 | 8583 | 409 | 2.849462 | 11.65429958 | Thermomicrobiales bacterium | 2482790 | Bacteria | Bacteria | 166 | 2.88e-45 | NR | HYO29932.1 | 2482790 | g8477 | i0 | 59.3 | 3.09535452322738 | 140 | 53 | 99.8 | 1 | 2 | 409 | 198 | 337 | HYO29932.1 LodA/GoxA family CTQ-dependent oxidase [Thermomicrobiales bacterium] | diamond | 1266 | 166 | 1 | Bacteria | Pseudomonadati | Thermomicrobiota | Thermomicrobia | Thermomicrobiales | Thermomicrobiales bacterium | ||||
| 4237192 | 4237192 | PRJNA393181_S_NODE_15584_length_304_cov_2.176030_g15478_i0 | PRJNA393181 | 15584 | 304 | 2.17603 | 6.6151312 | Thermomicrobiales bacterium | 2482790 | Bacteria | Bacteria | 195 | 7.409999999999999e-57 | NR | HEU5326587.1 | 2482790 | g15478 | i0 | 88.5 | 0.947368421052632 | 96 | 11 | 94.7 | 0 | 290 | 3 | 83 | 178 | HEU5326587.1 CocE/NonD family hydrolase [Thermomicrobiales bacterium] | diamond | 288 | 195 | 1 | Bacteria | Pseudomonadati | Thermomicrobiota | Thermomicrobia | Thermomicrobiales | Thermomicrobiales bacterium | ||||
| 9338193 | 9338193 | PRJNA393181_S_NODE_14488_length_317_cov_1.896429_g14382_i0 | PRJNA393181 | 14488 | 317 | 1.896429 | 6.01167993 | Thermomicrobiales bacterium | 2482790 | Bacteria | Bacteria | 119 | 1.05e-28 | NR | HYO29932.1 | 2482790 | g14382 | i0 | 59.8 | 1.01261829652997 | 107 | 32 | 92.7 | 2 | 22 | 315 | 1 | 105 | HYO29932.1 LodA/GoxA family CTQ-dependent oxidase [Thermomicrobiales bacterium] | diamond | 321 | 119 | 1 | Bacteria | Pseudomonadati | Thermomicrobiota | Thermomicrobia | Thermomicrobiales | Thermomicrobiales bacterium | ||||
| 10006518 | 10006518 | PRJNA393181_S_NODE_24888_length_230_cov_3.020725_g24782_i0 | PRJNA393181 | 24888 | 230 | 3.020725 | 6.9476675 | Thermomicrobiales bacterium | 2482790 | Bacteria | Bacteria | 88.6 | 1.1e-18 | NR | HEX5500557.1 | 2482790 | g24782 | i0 | 60.5 | 0.991304347826087 | 76 | 30 | 99.1 | 0 | 3 | 230 | 265 | 340 | HEX5500557.1 isochorismatase family protein [Thermomicrobiales bacterium] | diamond | 228 | 88.6 | 1 | Bacteria | Pseudomonadati | Thermomicrobiota | Thermomicrobia | Thermomicrobiales | Thermomicrobiales bacterium | ||||
| 14439898 | 14439898 | PRJNA393181_S_NODE_9132_length_398_cov_2.559557_g9026_i0 | PRJNA393181 | 9132 | 398 | 2.559557 | 10.18703686 | Thermomicrobiales bacterium | 2482790 | Bacteria | Bacteria | 147 | 1.06e-40 | NR | HEU5328038.1 | 2482790 | g9026 | i0 | 62.1 | 2.32160804020101 | 103 | 39 | 77.6 | 0 | 2 | 310 | 183 | 285 | HEU5328038.1 amidohydrolase family protein [Thermomicrobiales bacterium] | diamond | 924 | 147 | 1 | Bacteria | Pseudomonadati | Thermomicrobiota | Thermomicrobia | Thermomicrobiales | Thermomicrobiales bacterium | ||||
| 16988144 | 16988144 | PRJNA393181_S_NODE_37534_length_176_cov_3.165468_g37428_i0 | PRJNA393181 | 37534 | 176 | 3.165468 | 5.57122368 | Sphaerobacter thermophilus | 2057 | Bacteria | Bacteria | 62.1 | 2.47e-5 | NTclustered | gi|269787736|gb|CP001824.1| | 479434 | g37428 | i0 | 92.857 | 1.31818181818182 | 42 | 3 | 24 | 0 | 7 | 48 | 409713 | 409672 | Sphaerobacter thermophilus DSM 20745 chromosome 2, complete sequence | blastn | 232 | 62.1 | 1 | Bacteria | Pseudomonadati | Thermomicrobiota | Thermomicrobia | Sphaerobacterales | Sphaerobacteraceae | Sphaerobacter | Sphaerobacter thermophilus | ||
| 25304406 | 25304406 | PRJNA393181_S_NODE_10080_length_380_cov_2.676385_g9974_i0 | PRJNA393181 | 10080 | 380 | 2.676385 | 10.170263 | Thermomicrobiales bacterium | 2482790 | Bacteria | Bacteria | 72.4 | 7.07e-12 | NR | MEZ4569790.1 | 2482790 | g9974 | i0 | 40.7 | 1.06578947368421 | 135 | 68 | 97.9 | 4 | 373 | 2 | 275 | 408 | MEZ4569790.1 ABC transporter permease subunit [Thermomicrobiales bacterium] | diamond | 405 | 72.4 | 1 | Bacteria | Pseudomonadati | Thermomicrobiota | Thermomicrobia | Thermomicrobiales | Thermomicrobiales bacterium | ||||
| 26885672 | 26885672 | PRJNA393181_S_NODE_41801_length_164_cov_1.811024_g41695_i0 | PRJNA393181 | 41801 | 164 | 1.811024 | 2.97007936 | Thermomicrobiales bacterium | 2482790 | Bacteria | Bacteria | 74.3 | 3.91e-14 | NR | HEU0116646.1 | 2482790 | g41695 | i0 | 65.4 | 1.86585365853659 | 52 | 17 | 95.1 | 1 | 163 | 8 | 219 | 269 | HEU0116646.1 TIM barrel protein [Thermomicrobiales bacterium] | diamond | 306 | 74.3 | 1 | Bacteria | Pseudomonadati | Thermomicrobiota | Thermomicrobia | Thermomicrobiales | Thermomicrobiales bacterium | ||||
| 27503048 | 27503048 | PRJNA393181_S_NODE_23963_length_236_cov_2.326633_g23857_i0 | PRJNA393181 | 23963 | 236 | 2.326633 | 5.49085388 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 57 | 1.52e-7 | NR | HEX5502477.1 | 2482790 | g23857 | i0 | 43.6 | 6.08898305084746 | 78 | 39 | 99.2 | 1 | 3 | 236 | 71 | 143 | HEX5502477.1 ABATE domain-containing protein [Thermomicrobiales bacterium] | diamond | 1437 | 57 | 1 | Bacteria | Pseudomonadati | Thermomicrobiota | Thermomicrobia | Thermomicrobiales | Thermomicrobiales bacterium | ||||
| 27612560 | 27612560 | PRJNA393181_S_NODE_8444_length_412_cov_2.816000_g8338_i0 | PRJNA393181 | 8444 | 412 | 2.816 | 11.60192 | Thermomicrobiales bacterium | 2482790 | Bacteria | Bacteria | 114 | 3.1e-26 | NR | HEY7036591.1 | 2482790 | g8338 | i0 | 50.4 | 0.968446601941748 | 133 | 58 | 92.5 | 5 | 397 | 17 | 856 | 986 | HEY7036591.1 N-acetylmuramoyl-L-alanine amidase [Thermomicrobiales bacterium] | diamond | 399 | 114 | 1 | Bacteria | Pseudomonadati | Thermomicrobiota | Thermomicrobia | Thermomicrobiales | Thermomicrobiales bacterium | ||||
| 32414995 | 32414995 | PRJNA393181_S_NODE_26819_length_220_cov_1.508197_g26713_i0 | PRJNA393181 | 26819 | 220 | 1.508197 | 3.3180334 | Thermomicrobiales bacterium | 2482790 | Bacteria | Bacteria | 60.1 | 2.1e-8 | NR | HEX3301592.1 | 2482790 | g26713 | i0 | 49.2 | 0.804545454545455 | 59 | 29 | 79.1 | 1 | 184 | 11 | 251 | 309 | HEX3301592.1 FAD-binding oxidoreductase [Thermomicrobiales bacterium] | diamond | 177 | 60.1 | 1 | Bacteria | Pseudomonadati | Thermomicrobiota | Thermomicrobia | Thermomicrobiales | Thermomicrobiales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;