RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA393181", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA393181 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11889558 11889558 PRJNA393181_S_NODE_39150_length_171_cov_4.022388_g39044_i0 PRJNA393181 39150 171 4.022388 6.87828348 Gregarina niphandrodes 110365 SAR_Eukaryotes SAR_Eukaryotes 67.6 5.11e-7   NTclustered gi|749156808|ref|XM_011131731.1| 110365 g39044 i0 97.436 0.947368421052632 39 1 23 0 64 102 472 510 Gregarina niphandrodes hypothetical protein partial mRNA blastn 162 67.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes
29064908 29064908 PRJNA393181_S_NODE_26968_length_219_cov_2.082418_g26862_i0 PRJNA393181 26968 219 2.082418 4.56049542 Theileria equi strain WA 1537102 SAR_Eukaryotes SAR_Eukaryotes 67 2.27e-11   NR XP_004832625.1 1537102 g26862 i0 71.8 3.91780821917808 39 11 53.4 0 119 3 2 40 XP_004832625.1 Ras-related protein Rab1b small GTP-binding protein [Theileria equi strain WA] diamond 858 67 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria equi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;