RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA393181", tax_clade = "Opisthokonta" and tax_phylum = "Basidiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 4 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 4 ✖

bioproject 1

  • PRJNA393181 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14439528 14439528 PRJNA393181_S_NODE_36852_length_179_cov_1.338028_g36746_i0 PRJNA393181 36852 179 1.338028 2.39507012 Agaricomycetes 155619 Fungi Fungi 95.5 8.429999999999999e-23   NR TEB38703.1 71717 g36746 i0 79.3 252.45251396648 58 12 97.2 0 1 174 12 69 TEB38703.1 ras-domain-containing protein [Coprinellus micaceus] diamond 45189 95.9 0.995828988529718 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Psathyrellaceae Coprinellus Coprinellus micaceus
24637211 24637211 PRJNA393181_S_NODE_43240_length_160_cov_2.495935_g43134_i0 PRJNA393181 43240 160 2.495935 3.993496 Malassezia restricta 76775 Fungi Fungi 285 1.2e-72   NTclustered gi|1546634208|ref|XM_027628764.1| 76775 g43134 i0 98.75 48.0375 160 2 100 0 1 160 244 85 Malassezia restricta small subunit ribosomal protein S27e (MRET_2137), partial mRNA blastn 7686 285 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
30865127 30865127 PRJNA393181_S_NODE_40494_length_168_cov_1.190840_g40388_i0 PRJNA393181 40494 168 1.19084 2.0006112 Malassezia restricta 76775 Fungi Fungi 90.9 2.51e-21   NR XP_027485772.1 76775 g40388 i0 78.2 0.982142857142857 55 12 98.2 0 166 2 96 150 XP_027485772.1 peptidyl-tRNA hydrolase, PTH2 family [Malassezia restricta] diamond 165 90.9 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
31086384 31086384 PRJNA393181_S_NODE_43375_length_160_cov_1.894309_g43269_i0 PRJNA393181 43375 160 1.894309 3.0308944 Testicularia cyperi 1882483 Fungi Fungi 83.6 2.93e-17   NR PWZ01463.1 1882483 g43269 i0 77.4 7.95 53 12 99.4 0 2 160 297 349 PWZ01463.1 NAD-dependent glycerol-3-phosphate dehydrogenase [Testicularia cyperi] diamond 1272 83.6 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Anthracoideaceae Testicularia Testicularia cyperi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;