RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA393181", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Poribacteria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA393181 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1685679 1685679 PRJNA393181_S_NODE_43562_length_160_cov_1.170732_g43456_i0 PRJNA393181 43562 160 1.170732 1.8731712 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 58.4 2.85e-4   NTclustered gi|2621703383|emb|OY762492.1| 2026781 g43456 i0 100 0.19375 31 0 19 0 68 98 730352 730382 MAG: Candidatus Poribacteria bacterium isolate 99769213-57d3-4dda-a27c-563ac69bc0fb genome assembly, chromosome: 1 blastn 31 58.4 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
27201551 27201551 PRJNA393181_S_NODE_5422_length_496_cov_3.263617_g5316_i0 PRJNA393181 5422 496 3.263617 16.18754032 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 45.4 0.0415   NR MDE0301083.1 2026781 g5316 i0 57.1 0.393145161290323 35 15 21.2 0 496 392 3 37 MDE0301083.1 tetratricopeptide repeat protein [Candidatus Poribacteria bacterium] diamond 195 45.4 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
30833570 30833570 PRJNA393181_S_NODE_1014_length_855_cov_3.029340_g954_i0 PRJNA393181 1014 855 3.02934 25.900857 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 158 2.54e-44   NR MBI1925795.1 2026781 g954 i0 48.4 1.64210526315789 159 73 52.6 1 352 801 10 168 MBI1925795.1 transposase [Candidatus Poribacteria bacterium] diamond 1404 158 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;