RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA390533" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA390533 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27075242 27075242 PRJNA390533_P_NODE_34902_length_209_cov_1.588235_g33875_i0 PRJNA390533 34902 209 1.588235 3.31941115 Thermoplasmata archaeon 1906666 Archaea Archaea 52.4 9.54e-6   NR MFQ6060303.1 1906666 g33875 i0 46 0.717703349282297 50 27 71.8 0 7 156 276 325 MFQ6060303.1 ATPase domain-containing protein [Thermoplasmata archaeon] diamond 150 52.4 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
30896928 30896928 PRJNA390533_P_NODE_25374_length_316_cov_1.003610_g24347_i0 PRJNA390533 25374 316 1.00361 3.1714076 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 46.6 0.00355   NR MEK9698609.1 2163009 g24347 i0 76.9 0.740506329113924 26 6 24.7 0 314 237 90 115 MEK9698609.1 terminase family protein [Candidatus Poseidoniales archaeon] diamond 234 46.6 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;