RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA390533" and tax_phylum = "Candidatus Bipolaricaulota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Bipolaricaulota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA390533 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22086001 22086001 PRJNA390533_P_NODE_17298_length_432_cov_1.702290_g16283_i0 PRJNA390533 17298 432 1.70229 7.3538928 Candidatus Bipolaricaulota bacterium 2306012 Bacteria Bacteria 130 3.2399999999999996e-32   NR MFC2099450.1 2306012 g16283 i0 78.6 1.45833333333333 70 15 48.6 0 216 425 279 348 MFC2099450.1 site-specific DNA-methyltransferase [Candidatus Bipolaricaulota bacterium] diamond 630 130 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium
27376865 27376865 PRJNA390533_P_NODE_40303_length_179_cov_1.907143_g39276_i0 PRJNA390533 40303 179 1.907143 3.41378597 Bacillati 1783272 Bacteria Bacteria 82 2.22e-16   NR MCK4600042.1 2306012 g39276 i0 65 2.0111731843575398 60 20 98.9 1 1 177 63 122 MCK4600042.1 ABC transporter substrate-binding protein [Candidatus Bipolaricaulota bacterium] diamond 360 82.4 0.995145631067961 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium
31071703 31071703 PRJNA390533_P_NODE_21775_length_358_cov_1.796238_g20751_i0 PRJNA390533 21775 358 1.796238 6.43053204 Candidatus Bipolaricaulis 2250122 Bacteria Bacteria 85.9 1.17e-18   NR MBC7220816.1 2306012 g20751 i0 42 2.52234636871508 100 56 83.8 1 356 57 39 136 MBC7220816.1 NUDIX domain-containing protein [Candidatus Bipolaricaulota bacterium] diamond 903 85.9 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium
31718802 31718802 PRJNA390533_P_NODE_32417_length_228_cov_2.174603_g31390_i0 PRJNA390533 32417 228 2.174603 4.95809484 Candidatus Bipolaricaulota bacterium 2306012 Bacteria Bacteria 90.5 4.65e-19   NR MCK4600042.1 2306012 g31390 i0 58.9 6.75 73 29 96.1 1 7 225 409 480 MCK4600042.1 ABC transporter substrate-binding protein [Candidatus Bipolaricaulota bacterium] diamond 1539 90.5 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;