RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA390533", tax_kingdom = "Metazoa" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA390533 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11888487 11888487 PRJNA390533_P_NODE_29250_length_261_cov_2.414414_g28223_i0 PRJNA390533 29250 261 2.414414 6.30162054 Bicaularia tongensis 2035841 Cnidaria other_Eukaryota 65.8 3.06e-6   NTclustered gi|1246716251|gb|MG001906.1| 2035841 g28223 i0 76.86 3.11494252873563 121 24 46 4 30 150 1852 1736 Bicaularia tongensis voucher XMUB000550 large subunit ribosomal RNA gene, partial sequence blastn 813 65.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Symplectoscyphidae Bicaularia Bicaularia tongensis
15712497 15712497 PRJNA390533_P_NODE_40153_length_180_cov_1.439716_g39126_i0 PRJNA390533 40153 180 1.439716 2.5914888 Nausithoe rubra 168762 Cnidaria other_Eukaryota 165 1.88e-36   NTclustered gi|66864835|gb|AY920776.1| 168762 g39126 i0 90.984 7.28888888888889 122 11 68 0 30 151 1467 1346 Nausithoe rubra large subunit 28S ribosomal RNA gene, partial sequence blastn 1312 165 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Coronatae Nausithoidae Nausithoe Nausithoe rubra

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;