RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA390533", tax_kingdom = "Bacillati" and tax_phylum = "Candidatus Dormiibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA390533 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30770509 30770509 PRJNA390533_P_NODE_14274_length_497_cov_17.406114_g13290_i0 PRJNA390533 14274 497 17.406114 86.50838658 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 50.1 5.26e-5   NR HEY8673465.1 2052315 g13290 i0 48.3 0.362173038229376 60 31 36.2 0 100 279 1 60 HEY8673465.1 CsbD family protein [Candidatus Dormiibacterota bacterium] diamond 180 50.1 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
31655349 31655349 PRJNA390533_P_NODE_49957_length_151_cov_1.464286_g48930_i0 PRJNA390533 49957 151 1.464286 2.21107186 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 47.4 1.35e-4   NR HEY3195703.1 2052315 g48930 i0 52.1 2.84105960264901 48 20 95.4 1 3 146 32 76 HEY3195703.1 class I SAM-dependent methyltransferase [Candidatus Dormiibacterota bacterium] diamond 429 47.4 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;