RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA390533", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA390533 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8063280 8063280 PRJNA390533_P_NODE_9967_length_621_cov_3.008591_g9097_i0 PRJNA390533 9967 621 3.008591 18.68335011 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 972 0   NTclustered gi|1624698158|ref|XM_029013947.1| 189622 g9097 i0 95.854 1561.89855072464 603 22 97 1 2 601 1864 1262 Babesia ovata endonuclease-reverse transcriptase (BOVATA_050300), partial mRNA blastn 969939 972 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
31592418 31592418 PRJNA390533_P_NODE_14796_length_485_cov_6.760090_g13804_i0 PRJNA390533 14796 485 6.76009 32.7864365 Gregarina niphandrodes 110365 SAR_Eukaryotes SAR_Eukaryotes 51.6 1.64e-4   NR XP_011128749.1 110365 g13804 i0 46.4 0.890721649484536 56 30 34.6 0 306 473 73 128 XP_011128749.1 thioredoxin-like protein [Gregarina niphandrodes] diamond 432 51.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;