RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA390533", tax_clade = "PVC group" and tax_phylum = "Kiritimatiellota"

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tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA390533 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27549132 27549132 PRJNA390533_P_NODE_34644_length_211_cov_1.168605_g33617_i0 PRJNA390533 34644 211 1.168605 2.46575655 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 42 0.0447   NR MFO7869998.1 2212473 g33617 i0 38 1.00947867298578 71 42 98.1 2 209 3 193 263 MFO7869998.1 GH3 auxin-responsive promoter family protein [Kiritimatiellia bacterium] diamond 213 42 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
30580591 30580591 PRJNA390533_P_NODE_47353_length_157_cov_1.042373_g46326_i0 PRJNA390533 47353 157 1.042373 1.63652561 Kiritimatiellaeota bacterium B1221 3033806 Bacteria Bacteria 56.6 1.48e-7   NR MDF3129768.1 3033806 g46326 i0 58.8 1.89171974522293 51 21 97.5 0 4 156 327 377 MDF3129768.1 glycoside hydrolase family 3 protein [Kiritimatiellaeota bacterium B1221] diamond 297 56.6 1 Bacteria PVC group Pseudomonadati Kiritimatiellota         Kiritimatiellaeota bacterium B1221

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;