RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA390533", tax_clade = "Opisthokonta" and tax_phylum = "Mucoromycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 4 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 4 ✖

bioproject 1

  • PRJNA390533 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1684476 1684476 PRJNA390533_P_NODE_20502_length_377_cov_6.579882_g19478_i0 PRJNA390533 20502 377 6.579882 24.80615514 Mucor velutinosus 708070 Fungi Fungi 420 8.54e-113   NTclustered gi|2724906005|ref|XM_064829443.1| 708070 g19478 i0 90.764 15.7427055702918 314 29 83 0 30 343 314 1 Mucor velutinosus uncharacterized protein (ATC70_010223), partial mRNA blastn 5935 420 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor velutinosus
28102656 28102656 PRJNA390533_P_NODE_25825_length_311_cov_1.599265_g24798_i0 PRJNA390533 25825 311 1.599265 4.97371415 root 1 Root_unresolved Root_unresolved 55.5 2.54e-6   NR KAF9363945.1 1896193 g24798 i0 46.7 3.62700964630225 45 24 43.4 0 298 164 15 59 KAF9363945.1 hypothetical protein BGX34_002960 [Mortierella sp. NVP85] diamond 1128 55.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Mortierella Mortierella sp. NVP85
28654330 28654330 PRJNA390533_P_NODE_37807_length_191_cov_1.750000_g36780_i0 PRJNA390533 37807 191 1.75 3.3425 Calcarisporiella thermophila 911321 Fungi Fungi 46.6 8.14e-4   NR XP_069248705.1 911321 g36780 i0 36.5 2.49738219895288 63 40 99 0 191 3 20 82 XP_069248705.1 uncharacterized protein VTP21DRAFT_3826 [Calcarisporiella thermophila] diamond 477 46.6 1 Eukaryota Opisthokonta Fungi Mucoromycota   Calcarisporiellales Calcarisporiellaceae Calcarisporiella Calcarisporiella thermophila
32273671 32273671 PRJNA390533_P_NODE_33158_length_222_cov_1.218579_g32131_i0 PRJNA390533 33158 222 1.218579 2.70524538 Haplosporangium 979650 Fungi Fungi 44.3 0.00776   NR KAF9184024.1 1897647 g32131 i0 37 1.45945945945946 54 34 73 0 3 164 46 99 KAF9184024.1 hypothetical protein BGZ51_003640 [Haplosporangium sp. Z 767] diamond 324 44.3 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Haplosporangium Haplosporangium sp. Z 767

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;