contig_metadata
1 row where bioproject = "PRJNA390533" and tax_clade = "Candidatus Halobeggiatoa"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30012219 | 30012219 | PRJNA390533_P_NODE_31711_length_235_cov_1.193878_g30684_i0 | PRJNA390533 | 31711 | 235 | 1.193878 | 2.8056133 | Candidatus Halobeggiatoa sp. HSG11 | 3055495 | Bacteria | Bacteria | 131 | 1.77e-33 | NR | MDM8567414.1 | 3055495 | g30684 | i0 | 76.4 | 2.78297872340426 | 72 | 17 | 91.9 | 0 | 6 | 221 | 811 | 882 | MDM8567414.1 N-6 DNA methylase [Candidatus Halobeggiatoa sp. HSG11] | diamond | 654 | 131 | 1 | Bacteria | Candidatus Halobeggiatoa | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Thiotrichales | Thiotrichaceae | Candidatus Halobeggiatoa sp. HSG11 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;