RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA390533", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA390533 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30960016 30960016 PRJNA390533_P_NODE_38794_length_186_cov_1.741497_g37767_i0 PRJNA390533 38794 186 1.741497 3.23918442 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 105 6.19e-25   NR HYT45602.1 2072417 g37767 i0 75.4 0.983870967741935 61 15 98.4 0 184 2 89 149 HYT45602.1 restriction endonuclease subunit S [Candidatus Methylomirabilota bacterium] diamond 183 105 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
32761912 32761912 PRJNA390533_P_NODE_37480_length_193_cov_1.435065_g36453_i0 PRJNA390533 37480 193 1.435065 2.76967545 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 62.8 1.67e-9   NR HXU91467.1 2072417 g36453 i0 60 0.932642487046632 60 24 93.3 0 181 2 305 364 HXU91467.1 response regulator [Candidatus Methylomirabilota bacterium] diamond 180 62.8 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;