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contig_metadata

23 rows where bioproject = "PRJNA390533" and tax_clade = "Bacteria candidate phyla"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 23 ✖

bioproject 1

  • PRJNA390533 · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4236804 4236804 PRJNA390533_P_NODE_31524_length_236_cov_6.771574_g30497_i0 PRJNA390533 31524 236 6.771574 15.98091464 Candidatus Saccharibacteria bacterium TM7i 2980174 Bacteria Bacteria 281 2.48e-71   NTclustered gi|2306681518|gb|CP075337.1| 2980174 g30497 i0 90.323 68.0720338983051 217 18 92 3 1 216 668127 668341 Candidatus Saccharibacteria bacterium TM7i chromosome, complete genome blastn 16065 281 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium TM7i
8730961 8730961 PRJNA390533_P_NODE_8707_length_667_cov_2.694268_g7894_i0 PRJNA390533 8707 667 2.694268 17.97076756 Candidatus Saccharimonas 1331051 Bacteria Bacteria 531 6.999999999999998e-146   NTclustered gi|499052612|gb|CP005957.1| 1332188 g7894 i0 96.296 64.0254872563718 324 11 81 1 331 654 696089 696411 Candidatus Saccharimonas aalborgensis isolate TM71 chromosome, complete genome blastn 42705 536 0.990671641791045 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas aalborgensis
9337698 9337698 PRJNA390533_P_NODE_20468_length_378_cov_1.870206_g19444_i0 PRJNA390533 20468 378 1.870206 7.06937868 Candidatus Saccharibacteria genomosp. TM7-H1 2080739 Bacteria Bacteria 654 0   NTclustered gi|1566427536|gb|CP026537.1| 2080739 g19444 i0 99.444 76.6798941798942 360 2 95 0 19 378 545002 544643 Candidatus Saccharibacteria genomosp. TM7-H1 isolate E1 chromosome blastn 28985 654 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria genomosp. TM7-H1
15712174 15712174 PRJNA390533_P_NODE_12413_length_547_cov_3.183071_g11472_i0 PRJNA390533 12413 547 3.183071 17.41139837 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 488 3.459999999999999e-133   NTclustered gi|1950821269|gb|CP066696.1| 2026720 g11472 i0 84.158 14.9360146252285 505 78 92 2 23 526 473677 473174 Candidatus Saccharibacteria bacterium isolate NC_groundwater_1927_Pr3_S-0.2um_48_6 chromosome blastn 8170 488 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
18261472 18261472 PRJNA390533_P_NODE_45535_length_161_cov_2.336066_g44508_i0 PRJNA390533 45535 161 2.336066 3.76106626 Candidatus Moraniibacteriota bacterium 2045217 Bacteria Bacteria 80.5 6.14e-11   NTclustered gi|1958029560|gb|CP064974.1| 2045217 g44508 i0 92.727 18.2670807453416 55 4 34 0 3 57 929338 929392 MAG: Candidatus Moraniibacteriota bacterium isolate EsbW_18-Q3-R4-48_MAXAC.267_cln chromosome, complete genome blastn 2941 80.5 1 Bacteria Bacteria candidate phyla   Candidatus Moraniibacteriota         Candidatus Moraniibacteriota bacterium
20811503 20811503 PRJNA390533_P_NODE_45597_length_161_cov_1.836066_g44570_i0 PRJNA390533 45597 161 1.836066 2.95606626 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 77.4 1.47e-16   NR RMD62501.1 2762014 g44570 i0 75 1.80745341614907 48 12 89.4 0 4 147 78 125 RMD62501.1 MAG: type II toxin-antitoxin system VapC family toxin [Candidatus Parcubacteria bacterium] diamond 291 77.4 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
22086001 22086001 PRJNA390533_P_NODE_17298_length_432_cov_1.702290_g16283_i0 PRJNA390533 17298 432 1.70229 7.3538928 Candidatus Bipolaricaulota bacterium 2306012 Bacteria Bacteria 130 3.2399999999999996e-32   NR MFC2099450.1 2306012 g16283 i0 78.6 1.45833333333333 70 15 48.6 0 216 425 279 348 MFC2099450.1 site-specific DNA-methyltransferase [Candidatus Bipolaricaulota bacterium] diamond 630 130 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium
22086209 22086209 PRJNA390533_P_NODE_3558_length_992_cov_12.804827_g3050_i0 PRJNA390533 3558 992 12.804827 127.02388384 Candidatus Saccharibacteria genomosp. TM7-H1 2080739 Bacteria Bacteria 1755 0   NTclustered gi|1566427536|gb|CP026537.1| 2080739 g3050 i0 99.895 139.664314516129 953 1 96 0 15 967 543272 544224 Candidatus Saccharibacteria genomosp. TM7-H1 isolate E1 chromosome blastn 138547 1755 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria genomosp. TM7-H1
26711998 26711998 PRJNA390533_P_NODE_10841_length_593_cov_1.844765_g9940_i0 PRJNA390533 10841 593 1.844765 10.93945645 Bacillati 1783272 Bacteria Bacteria 106 1.13e-22   NR MBI3455932.1 2053607 g9940 i0 81.4 0.895446880269814 59 11 29.8 0 178 2 39 97 MBI3455932.1 bifunctional YncE family protein/alkaline phosphatase family protein [Candidatus Rokuibacteriota bacterium] diamond 531 106 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
27376865 27376865 PRJNA390533_P_NODE_40303_length_179_cov_1.907143_g39276_i0 PRJNA390533 40303 179 1.907143 3.41378597 Bacillati 1783272 Bacteria Bacteria 82 2.22e-16   NR MCK4600042.1 2306012 g39276 i0 65 2.0111731843575398 60 20 98.9 1 1 177 63 122 MCK4600042.1 ABC transporter substrate-binding protein [Candidatus Bipolaricaulota bacterium] diamond 360 82.4 0.995145631067961 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium
27423143 27423143 PRJNA390533_P_NODE_1103_length_1497_cov_26.107682_g910_i0 PRJNA390533 1103 1497 26.107682 390.83199954 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 229 2.7399999999999997e-66   NR MBM3238041.1 2026781 g910 i0 45.1 1.69539078156313 275 144 55.1 4 1494 670 121 388 MBM3238041.1 transposase [Candidatus Poribacteria bacterium] diamond 2538 229 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
27629372 27629372 PRJNA390533_P_NODE_30684_length_245_cov_1.577670_g29657_i0 PRJNA390533 30684 245 1.57767 3.8652915 Bacteria 2 Bacteria Bacteria 117 6.329999999999999e-31   NR MCA9342090.1 2026720 g29657 i0 70 1.9469387755102 80 24 98 0 243 4 21 100 MCA9342090.1 VIT1/CCC1 transporter family protein [Candidatus Saccharibacteria bacterium] diamond 477 117 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
27818825 27818825 PRJNA390533_P_NODE_38044_length_190_cov_1.331126_g37017_i0 PRJNA390533 38044 190 1.331126 2.5291394 Candidatus Saccharimonas 1331051 Bacteria Bacteria 99.8 1.52e-22   NR RKW02814.1 1917697 g37017 i0 94.8 1.83157894736842 58 3 91.6 0 188 15 407 464 RKW02814.1 MAG: hypothetical protein D8B38_02535 [Candidatus Saccharimonas sp.] diamond 348 99.8 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
28433332 28433332 PRJNA390533_P_NODE_25086_length_316_cov_1.184116_g24059_i0 PRJNA390533 25086 316 1.184116 3.74180656 Patescibacteria group bacterium 2052139 Bacteria Bacteria 55.1 3.85e-6   NR MES2876317.1 2052139 g24059 i0 84.6 0.246835443037975 26 4 24.7 0 3 80 360 385 MES2876317.1 methionine--tRNA ligase [Patescibacteria group bacterium] diamond 78 55.1 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
28671242 28671242 PRJNA390533_P_NODE_25187_length_316_cov_1.126354_g24160_i0 PRJNA390533 25187 316 1.126354 3.55927864 Bacteria 2 Bacteria Bacteria 52.8 2.46e-5   NR HXS71800.1 2052139 g24160 i0 96.2 0.493670886075949 26 1 24.7 0 238 315 61 86 HXS71800.1 PAS domain-containing protein [Patescibacteria group bacterium] diamond 156 52.8 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
30106736 30106736 PRJNA390533_P_NODE_132_length_2709_cov_5.586142_g104_i0 PRJNA390533 132 2709 5.586142 151.32858678 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 412 3.85e-133   NR HBO64817.1 2026720 g104 i0 62.6 0.355481727574751 321 120 35.5 0 953 1915 8 328 HBO64817.1 glycosyl transferase family 2 [Candidatus Saccharibacteria bacterium] diamond 963 412 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
30960016 30960016 PRJNA390533_P_NODE_38794_length_186_cov_1.741497_g37767_i0 PRJNA390533 38794 186 1.741497 3.23918442 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 105 6.19e-25   NR HYT45602.1 2072417 g37767 i0 75.4 0.983870967741935 61 15 98.4 0 184 2 89 149 HYT45602.1 restriction endonuclease subunit S [Candidatus Methylomirabilota bacterium] diamond 183 105 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
30991643 30991643 PRJNA390533_P_NODE_25234_length_316_cov_1.104693_g24207_i0 PRJNA390533 25234 316 1.104693 3.49082988 Minisyncoccia bacterium 3120121 Bacteria Bacteria 46.6 0.004   NR MFT5532538.1 3120121 g24207 i0 77.8 0.256329113924051 27 6 25.6 0 316 236 548 574 MFT5532538.1 type IV pilus assembly protein PilY1 [Minisyncoccia bacterium] diamond 81 46.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota Minisyncoccia       Minisyncoccia bacterium
31055043 31055043 PRJNA390533_P_NODE_46175_length_160_cov_1.115702_g45148_i0 PRJNA390533 46175 160 1.115702 1.7851232 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 41.2 0.0437   NR MBI1799113.1 2212470 g45148 i0 39.5 0.80625 43 26 80.6 0 10 138 386 428 MBI1799113.1 T9SS type A sorting domain-containing protein [Candidatus Eiseniibacteriota bacterium] diamond 129 41.2 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
31071703 31071703 PRJNA390533_P_NODE_21775_length_358_cov_1.796238_g20751_i0 PRJNA390533 21775 358 1.796238 6.43053204 Candidatus Bipolaricaulis 2250122 Bacteria Bacteria 85.9 1.17e-18   NR MBC7220816.1 2306012 g20751 i0 42 2.52234636871508 100 56 83.8 1 356 57 39 136 MBC7220816.1 NUDIX domain-containing protein [Candidatus Bipolaricaulota bacterium] diamond 903 85.9 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium
31718802 31718802 PRJNA390533_P_NODE_32417_length_228_cov_2.174603_g31390_i0 PRJNA390533 32417 228 2.174603 4.95809484 Candidatus Bipolaricaulota bacterium 2306012 Bacteria Bacteria 90.5 4.65e-19   NR MCK4600042.1 2306012 g31390 i0 58.9 6.75 73 29 96.1 1 7 225 409 480 MCK4600042.1 ABC transporter substrate-binding protein [Candidatus Bipolaricaulota bacterium] diamond 1539 90.5 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium
32193410 32193410 PRJNA390533_P_NODE_24618_length_316_cov_1.989170_g23591_i0 PRJNA390533 24618 316 1.98917 6.2857772 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 72.4 2.48e-12   NR GIW41260.1 2838779 g23591 i0 48.6 3.29430379746835 70 36 66.5 0 212 3 165 234 GIW41260.1 MAG: hypothetical protein KatS3mg076_1837 [Candidatus Binatia bacterium] diamond 1041 72.4 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32761912 32761912 PRJNA390533_P_NODE_37480_length_193_cov_1.435065_g36453_i0 PRJNA390533 37480 193 1.435065 2.76967545 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 62.8 1.67e-9   NR HXU91467.1 2072417 g36453 i0 60 0.932642487046632 60 24 93.3 0 181 2 305 364 HXU91467.1 response regulator [Candidatus Methylomirabilota bacterium] diamond 180 62.8 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;