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contig_metadata

9 rows where bioproject = "PRJNA385396" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA385396 · 9 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1681790 1681790 PRJNA385396_P_NODE_21222_length_241_cov_0.916667_g21130_i0 PRJNA385396 21222 241 0.916667 2.20916747 Candidatus Culexarchaeum yellowstonense 2928963 Archaea Archaea 92.8 2.79e-20   NR WP_304330045.1 2928963 g21130 i0 53.8 3.88381742738589 78 36 97.1 0 4 237 46 123 WP_304330045.1 phosphoribosylglycinamide formyltransferase [Candidatus Culexarchaeum yellowstonense] diamond 936 92.8 1 Archaea   Thermoproteati Candidatus Culexarchaeota Candidatus Culexarchaeia Candidatus Culexarchaeles Candidatus Culexarchaeaceae Candidatus Culexarchaeum Candidatus Culexarchaeum yellowstonense
5510787 5510787 PRJNA385396_P_NODE_3605_length_409_cov_1.357143_g3513_i0 PRJNA385396 3605 409 1.357143 5.55071487 archaeon 1906665 Archaea Archaea 150 2.24e-41   NR RYH13701.1 1906665 g3513 i0 68.8 0.821515892420538 112 35 82.2 0 407 72 184 295 RYH13701.1 MAG: 50S ribosomal protein L4 [archaeon] diamond 336 150 1 Archaea               archaeon
8060045 8060045 PRJNA385396_P_NODE_13307_length_251_cov_1.275281_g13215_i0 PRJNA385396 13307 251 1.275281 3.20095531 archaeon 1906665 Archaea Archaea 84 1.16e-17   NR MDP2436279.1 1906665 g13215 i0 65 0.717131474103586 60 21 71.7 0 70 249 1 60 MDP2436279.1 hypothetical protein [archaeon] diamond 180 84 1 Archaea               archaeon
26917036 26917036 PRJNA385396_P_NODE_15022_length_249_cov_0.875000_g14930_i0 PRJNA385396 15022 249 0.875 2.17875 archaeon 1906665 Archaea Archaea 71.6 1.61e-12   NR RYY32008.1 1906665 g14930 i0 47.6 0.987951807228916 82 41 98.8 1 247 2 186 265 RYY32008.1 MAG: hypothetical protein EON62_05930, partial [archaeon] diamond 246 71.6 1 Archaea               archaeon
28054258 28054258 PRJNA385396_P_NODE_20105_length_243_cov_0.876471_g20013_i0 PRJNA385396 20105 243 0.876471 2.12982453 Thermoproteota archaeon 2056631 Archaea Archaea 78.6 7.88e-15   NR RLG38098.1 2056631 g20013 i0 46.8 1.95061728395062 79 42 97.5 0 6 242 69 147 RLG38098.1 MAG: IMP dehydrogenase, partial [Thermoproteota archaeon] diamond 474 78.6 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
28559660 28559660 PRJNA385396_P_NODE_20487_length_242_cov_0.911243_g20395_i0 PRJNA385396 20487 242 0.911243 2.20520806 Sulfolobus sp. E5 2200884 Archaea Archaea 141 4.3999999999999996e-38   NR TRM73770.1 2200884 g20395 i0 93.8 0.991735537190083 80 5 99.2 0 240 1 113 192 TRM73770.1 acetaldehyde dehydrogenase [Sulfolobus sp. E5] diamond 240 141 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Sulfolobus Sulfolobus sp. E5
30675384 30675384 PRJNA385396_P_NODE_19293_length_244_cov_0.900585_g19201_i0 PRJNA385396 19293 244 0.900585 2.1974274 archaeon 1906665 Archaea Archaea 122 6.239999999999999e-31   NR MCP4764199.1 1906665 g19201 i0 66.3 1.95491803278689 80 27 98.4 0 5 244 193 272 MCP4764199.1 aspartate aminotransferase family protein [archaeon] diamond 477 122 1 Archaea               archaeon
31339095 31339095 PRJNA385396_P_NODE_20636_length_242_cov_0.911243_g20544_i0 PRJNA385396 20636 242 0.911243 2.20520806 archaeon 1906665 Archaea Archaea 90.5 1.41e-19   NR RYG65511.1 1906665 g20544 i0 62 0.979338842975207 79 30 97.9 0 238 2 96 174 RYG65511.1 MAG: hypothetical protein EON64_11755 [archaeon] diamond 237 90.5 1 Archaea               archaeon
32761856 32761856 PRJNA385396_P_NODE_1640_length_575_cov_1.450199_g1548_i0 PRJNA385396 1640 575 1.450199 8.33864425 Natrialba chahannaoensis 68911 Archaea Archaea 44.3 0.0243   NR WP_006165844.1 68911 g1548 i0 34.9 0.43304347826087 83 51 41.7 2 209 448 12 94 WP_006165844.1 PAAR domain-containing protein [Natrialba chahannaoensis] diamond 249 44.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrialba Natrialba chahannaoensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;