RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA385396", tax_phylum = "Pisuviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA385396 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6784453 6784453 PRJNA385396_P_NODE_12306_length_260_cov_1.347594_g12214_i0 PRJNA385396 12306 260 1.347594 3.5037444 Zebrafish picornavirus 1 2304617 Viruses Viruses 449 7.190000000000001e-122   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g12214 i0 98.062 2.98461538461538 258 5 99 0 1 258 7885 7628 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 776 449 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
22083511 22083511 PRJNA385396_P_NODE_4278_length_384_cov_1.482315_g4186_i0 PRJNA385396 4278 384 1.482315 5.6920896 Zebrafish picornavirus 1 2304617 Viruses Viruses 640 6.149999999999999e-179   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g4186 i0 96.859 2.99479166666667 382 12 99 0 3 384 6460 6841 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 1150 640 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;