RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA385396" and tax_phylum = "Negarnaviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA385396 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10611036 10611036 PRJNA385396_P_NODE_9589_length_289_cov_1.425926_g9497_i0 PRJNA385396 9589 289 1.425926 4.12092614 Okutama tick virus 2583479 Viruses Viruses 534 2.18e-147   NTclustered gi|2473913780|gb|OQ513686.1| 2583479 g9497 i0 100 100.356401384083 289 0 100 0 1 289 6603 6891 MAG: Okutama tick virus isolate SDQDR04 genomic sequence blastn 29003 534 1 Viruses   Orthornavirae Negarnaviricota Bunyaviricetes Hareavirales Phenuiviridae Phlebovirus Okutama tick virus
29744375 29744375 PRJNA385396_P_NODE_3430_length_417_cov_2.026163_g3338_i0 PRJNA385396 3430 417 2.026163 8.44909971 Chuvivirus 2842604 Viruses Viruses 182 2.2499999999999993e-52   NR WET19887.1 2842604 g3338 i0 63.8 1.98561151079137 138 50 99.3 0 414 1 243 380 WET19887.1 MAG: nucleoprotein [Freshwater turtle neural virus 1] diamond 828 182 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Chuvivirus Chuvivirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;