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contig_metadata

9 rows where bioproject = "PRJNA385396", tax_phylum = "Chloroflexota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 9 ✖

tax_phylum 1

  • Chloroflexota · 9 ✖

tax_kingdom 1

bioproject 1

  • PRJNA385396 · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1681784 1681784 PRJNA385396_P_NODE_20782_length_242_cov_0.911243_g20690_i0 PRJNA385396 20782 242 0.911243 2.20520806 Chloroflexia bacterium 2448782 Bacteria Bacteria 145 7.879999999999999e-40   NR MBA2470171.1 2448782 g20690 i0 91.3 0.991735537190083 80 7 99.2 0 3 242 169 248 MBA2470171.1 beta-ketoacyl-ACP synthase II [Chloroflexia bacterium] diamond 240 145 1 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium
2957436 2957436 PRJNA385396_P_NODE_12263_length_260_cov_1.962567_g12171_i0 PRJNA385396 12263 260 1.962567 5.1026742 Chloroflexota bacterium 2026724 Bacteria Bacteria 150 8.17e-32   NTclustered gi|2621702192|emb|OY760183.1| 2026724 g12171 i0 87.121 47.5230769230769 132 17 51 0 38 169 2298803 2298672 MAG: Chloroflexota bacterium isolate 1e5240b1-722b-4dd6-bc08-6f4f73fd4587 genome assembly, chromosome: 1 blastn 12356 150 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
27201442 27201442 PRJNA385396_P_NODE_19602_length_243_cov_0.905882_g19510_i0 PRJNA385396 19602 243 0.905882 2.20129326 Caldilineaceae bacterium 2614250 Bacteria Bacteria 43.9 0.0135   NR HMN27863.1 2614250 g19510 i0 37.2 0.962962962962963 78 39 90.1 3 6 224 10 82 HMN27863.1 EamA family transporter RarD [Caldilineaceae bacterium] diamond 234 43.9 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
27787220 27787220 PRJNA385396_P_NODE_14724_length_250_cov_0.870056_g14632_i0 PRJNA385396 14724 250 0.870056 2.17514 PVC group 1783257 Bacteria Bacteria 44.7 0.00824   NR NLE99478.1 2073117 g14632 i0 38.2 1.788 76 40 91.2 2 230 3 150 218 NLE99478.1 serine/threonine protein kinase [Anaerolineales bacterium] diamond 447 45.1 0.991130820399113 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
27928056 27928056 PRJNA385396_P_NODE_16745_length_247_cov_0.885057_g16653_i0 PRJNA385396 16745 247 0.885057 2.18609079 Promineifilum sp. 2664178 Bacteria Bacteria 105 4.0999999999999994e-24   NR WP_343397146.1 2664178 g16653 i0 72 3.98380566801619 82 23 99.6 0 247 2 388 469 WP_343397146.1 chloride channel protein [Promineifilum sp.] diamond 984 105 1 Bacteria   Bacillati Chloroflexota Ardenticatenia Candidatus Promineifilales Candidatus Promineifilaceae Candidatus Promineifilum Promineifilum sp.
28748963 28748963 PRJNA385396_P_NODE_11207_length_271_cov_1.555556_g11115_i0 PRJNA385396 11207 271 1.555556 4.21555676 Caldilineaceae bacterium 2614250 Bacteria Bacteria 52 2.65e-5   NR MEZ4869450.1 2614250 g11115 i0 52.2 2.0590405904059 46 20 50.9 1 269 132 154 197 MEZ4869450.1 alpha/beta hydrolase [Caldilineaceae bacterium] diamond 558 52 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
31023108 31023108 PRJNA385396_P_NODE_21175_length_241_cov_0.916667_g21083_i0 PRJNA385396 21175 241 0.916667 2.20916747 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 54.7 6.99e-7   NR MCC7364785.1 2026734 g21083 i0 45.1 1.85477178423237 51 28 63.5 0 154 2 6 56 MCC7364785.1 tryptophan-rich sensory protein [Dehalococcoidia bacterium] diamond 447 54.7 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
31307463 31307463 PRJNA385396_P_NODE_12615_length_257_cov_1.673913_g12523_i0 PRJNA385396 12615 257 1.673913 4.30195641 Caldilineaceae bacterium 2614250 Bacteria Bacteria 42.7 0.0459   NR MBX3015411.1 2614250 g12523 i0 47.3 0.642023346303502 55 23 64.2 2 248 84 901 949 MBX3015411.1 discoidin domain-containing protein [Caldilineaceae bacterium] diamond 165 42.7 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
32003501 32003501 PRJNA385396_P_NODE_13638_length_251_cov_0.865169_g13546_i0 PRJNA385396 13638 251 0.865169 2.17157419 Anaerolineae bacterium 2052143 Bacteria Bacteria 42.7 0.039   NR MCC7355009.1 2052143 g13546 i0 37.7 0.920318725099602 77 36 84.9 4 19 231 40 110 MCC7355009.1 aldo/keto reductase [Anaerolineae bacterium] diamond 231 42.7 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;