RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA385396" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA385396 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26917038 26917038 PRJNA385396_P_NODE_7682_length_315_cov_0.867769_g7590_i0 PRJNA385396 7682 315 0.867769 2.73347235 Candidatus Velamenicoccus archaeovorus 1930593 Bacteria Bacteria 43.5 0.0385   NR MFB3739105.1 1930593 g7590 i0 44.4 0.6 63 30 55.2 1 38 211 196 258 MFB3739105.1 polysaccharide deacetylase family protein [Candidatus Velamenicoccus archaeovorus] diamond 189 43.5 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota       Candidatus Velamenicoccus Candidatus Velamenicoccus archaeovorus
32210213 32210213 PRJNA385396_P_NODE_10038_length_284_cov_1.246445_g9946_i0 PRJNA385396 10038 284 1.246445 3.5399038 Bacteria 2 Bacteria Bacteria 77 5.54e-14   NR OIO38185.1 1805290 g9946 i0 44.3 2.04929577464789 97 48 98.2 3 5 283 1006 1100 OIO38185.1 MAG: hypothetical protein AUJ71_03705 [Candidatus Omnitrophica bacterium CG1_02_49_16] diamond 582 77 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophica bacterium CG1_02_49_16

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;