contig_metadata
12 rows where bioproject = "PRJNA385396", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8060006 | 8060006 | PRJNA385396_P_NODE_12107_length_262_cov_1.486772_g12015_i0 | PRJNA385396 | 12107 | 262 | 1.486772 | 3.89534264 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 94 | 2.2e-20 | NR | UCF68842.1 | 1978231 | g12015 | i0 | 65.3 | 4.41984732824428 | 72 | 22 | 82.4 | 1 | 220 | 5 | 6 | 74 | UCF68842.1 MAG: molecular chaperone DnaJ [Acidobacteriota bacterium] | diamond | 1158 | 94 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 13160644 | 13160644 | PRJNA385396_P_NODE_17471_length_246_cov_0.890173_g17379_i0 | PRJNA385396 | 17471 | 246 | 0.890173 | 2.18982558 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 196 | 9.7e-46 | NTclustered | gi|2874254091|emb|OY970174.1| | 171953 | g17379 | i0 | 83.412 | 0.857723577235772 | 211 | 35 | 86 | 0 | 25 | 235 | 276970 | 277180 | MAG: uncultured Acidobacteriota bacterium isolate MFD01275.bin.c.18 genome assembly, chromosome: 1 | blastn | 211 | 196 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 24633649 | 24633649 | PRJNA385396_P_NODE_9780_length_287_cov_1.294393_g9688_i0 | PRJNA385396 | 9780 | 287 | 1.294393 | 3.71490791 | Bacteria | 2 | Bacteria | Bacteria | 108 | 6.43e-25 | NR | MBX3298465.1 | 1978231 | g9688 | i0 | 92.3 | 4.75609756097561 | 65 | 5 | 67.9 | 0 | 197 | 3 | 1 | 65 | MBX3298465.1 efflux RND transporter permease subunit [Acidobacteriota bacterium] | diamond | 1365 | 109 | 0.990825688073395 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 27092084 | 27092084 | PRJNA385396_P_NODE_17942_length_245_cov_0.895349_g17850_i0 | PRJNA385396 | 17942 | 245 | 0.895349 | 2.19360505 | Bacteria | 2 | Bacteria | Bacteria | 79.3 | 3.76e-15 | NR | HUB53504.1 | 1964191 | g17850 | i0 | 43.7 | 19.334693877551 | 87 | 43 | 99.2 | 3 | 244 | 2 | 140 | 226 | HUB53504.1 endo-1,4-beta-xylanase [Terracidiphilus sp.] | diamond | 4737 | 79.3 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Terracidiphilus | Terracidiphilus sp. | ||
| 27801884 | 27801884 | PRJNA385396_P_NODE_6464_length_334_cov_1.149425_g6372_i0 | PRJNA385396 | 6464 | 334 | 1.149425 | 3.8390795 | Bryobacteraceae bacterium | 2212468 | Bacteria | Bacteria | 54.7 | 7.24e-6 | NR | HKD10095.1 | 2212468 | g6372 | i0 | 44.3 | 5.32634730538922 | 88 | 43 | 74.6 | 3 | 334 | 86 | 187 | 273 | HKD10095.1 putative Ig domain-containing protein [Bryobacteraceae bacterium] | diamond | 1779 | 54.7 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Bryobacteraceae bacterium | |||
| 27959575 | 27959575 | PRJNA385396_P_NODE_21365_length_241_cov_0.916667_g21273_i0 | PRJNA385396 | 21365 | 241 | 0.916667 | 2.20916747 | Vicinamibacterales bacterium | 2910147 | Bacteria | Bacteria | 154 | 9e-43 | NR | HEU4691883.1 | 2910147 | g21273 | i0 | 88.8 | 0.995850622406639 | 80 | 9 | 99.6 | 0 | 2 | 241 | 287 | 366 | HEU4691883.1 hypothetical protein [Vicinamibacterales bacterium] | diamond | 240 | 154 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacterales bacterium | ||||
| 28843531 | 28843531 | PRJNA385396_P_NODE_20288_length_242_cov_0.911243_g20196_i0 | PRJNA385396 | 20288 | 242 | 0.911243 | 2.20520806 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 79 | 6.59e-15 | NR | HEY0458860.1 | 2283092 | g20196 | i0 | 57.1 | 2.90082644628099 | 77 | 31 | 95.5 | 2 | 11 | 241 | 291 | 365 | HEY0458860.1 M36 family metallopeptidase [Pyrinomonadaceae bacterium] | diamond | 702 | 79 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 29159638 | 29159638 | PRJNA385396_P_NODE_13109_length_253_cov_1.016667_g13017_i0 | PRJNA385396 | 13109 | 253 | 1.016667 | 2.57216751 | Bryobacteraceae bacterium | 2212468 | Bacteria | Bacteria | 98.6 | 2.32e-24 | NR | HTC90217.1 | 2212468 | g13017 | i0 | 65 | 1.43478260869565 | 60 | 21 | 71.1 | 0 | 253 | 74 | 51 | 110 | HTC90217.1 hypothetical protein [Bryobacteraceae bacterium] | diamond | 363 | 98.6 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Bryobacteraceae bacterium | |||
| 29980465 | 29980465 | PRJNA385396_P_NODE_6591_length_331_cov_1.891473_g6499_i0 | PRJNA385396 | 6591 | 331 | 1.891473 | 6.26077563 | Bryobacteraceae bacterium | 2212468 | Bacteria | Bacteria | 94.4 | 6.98e-22 | NR | HXI40267.1 | 2212468 | g6499 | i0 | 43.5 | 0.978851963746224 | 108 | 61 | 97.9 | 0 | 6 | 329 | 1 | 108 | HXI40267.1 pilus assembly protein N-terminal domain-containing protein [Bryobacteraceae bacterium] | diamond | 324 | 94.4 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Bryobacteraceae bacterium | |||
| 31971748 | 31971748 | PRJNA385396_P_NODE_17718_length_246_cov_0.890173_g17626_i0 | PRJNA385396 | 17718 | 246 | 0.890173 | 2.18982558 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 113 | 6.34e-27 | NR | MBS1829543.1 | 1978231 | g17626 | i0 | 74 | 1.8780487804878 | 77 | 20 | 93.9 | 0 | 245 | 15 | 864 | 940 | MBS1829543.1 hypothetical protein [Acidobacteriota bacterium] | diamond | 462 | 113 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 32320196 | 32320196 | PRJNA385396_P_NODE_13919_length_251_cov_0.865169_g13827_i0 | PRJNA385396 | 13919 | 251 | 0.865169 | 2.17157419 | Bryobacteraceae bacterium | 2212468 | Bacteria | Bacteria | 113 | 6.920000000000001e-27 | NR | HET8546730.1 | 2212468 | g13827 | i0 | 83.3 | 1.75697211155378 | 66 | 11 | 78.9 | 0 | 200 | 3 | 20 | 85 | HET8546730.1 TonB-dependent receptor [Bryobacteraceae bacterium] | diamond | 441 | 113 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Bryobacteraceae bacterium | |||
| 32667307 | 32667307 | PRJNA385396_P_NODE_21400_length_241_cov_0.916667_g21308_i0 | PRJNA385396 | 21400 | 241 | 0.916667 | 2.20916747 | Vicinamibacterales bacterium | 2910147 | Bacteria | Bacteria | 95.1 | 1.2099999999999999e-23 | NR | HET9469270.1 | 2910147 | g21308 | i0 | 78.2 | 2.04149377593361 | 55 | 12 | 68.5 | 0 | 241 | 77 | 22 | 76 | HET9469270.1 hypothetical protein [Vicinamibacterales bacterium] | diamond | 492 | 95.1 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacterales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;