RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA385396", tax_kingdom = "Orthornavirae" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 3 ✖

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA385396 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10611029 10611029 PRJNA385396_P_NODE_9409_length_291_cov_1.412844_g9317_i0 PRJNA385396 9409 291 1.412844 4.11137604 Poplar mosaic virus 12166 Viruses Viruses 156 7.089999999999998e-42   NR NP_958171.1 12166 g9317 i0 72.2 1 97 27 100 0 291 1 1289 1385 NP_958171.1 replicase [Poplar mosaic virus] diamond 291 156 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus populi
23358766 23358766 PRJNA385396_P_NODE_10399_length_280_cov_1.487923_g10307_i0 PRJNA385396 10399 280 1.487923 4.1661844 Poplar mosaic virus 12166 Viruses Viruses 175 1.48e-48   NR NP_958171.1 12166 g10307 i0 89.2 0.996428571428571 93 10 99.6 0 2 280 1744 1836 NP_958171.1 replicase [Poplar mosaic virus] diamond 279 175 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus populi
32003500 32003500 PRJNA385396_P_NODE_13018_length_253_cov_1.988889_g12926_i0 PRJNA385396 13018 253 1.988889 5.03188917 Poplar mosaic virus 12166 Viruses Viruses 130 1.39e-34   NR NP_958175.1 12166 g12926 i0 78.6 1.99209486166008 84 18 99.6 0 2 253 42 125 NP_958175.1 viral coat protein [Poplar mosaic virus] diamond 504 130 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus populi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;