RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA385396", tax_kingdom = "Metazoa" and tax_phylum = "Hemichordata"

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tax_superkingdom 1

tax_phylum 1

  • Hemichordata · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA385396 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19532593 19532593 PRJNA385396_P_NODE_11976_length_263_cov_1.621053_g11884_i0 PRJNA385396 11976 263 1.621053 4.26336939 Metazoa 33208 Hemichordata other_Eukaryota 87 6.92e-18   NR XP_070580867.1 63121 g11884 i0 50.6 5.88593155893536 85 40 94.7 1 2 250 4 88 XP_070580867.1 actin-1-like [Ptychodera flava] diamond 1548 87 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava
31687026 31687026 PRJNA385396_P_NODE_6097_length_340_cov_1.153558_g6005_i0 PRJNA385396 6097 340 1.153558 3.9220972 Ptychodera flava 63121 Hemichordata other_Eukaryota 60.8 4.89e-8   NR XP_070575269.1 63121 g6005 i0 36.9 2.94705882352941 111 58 97.9 4 338 6 301 399 XP_070575269.1 amine oxidase [flavin-containing] B-like isoform X2 [Ptychodera flava] diamond 1002 60.8 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;