RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA385396", tax_kingdom = "Metazoa" and tax_phylum = "Chaetognatha"

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tax_superkingdom 1

tax_phylum 1

  • Chaetognatha · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA385396 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28450263 28450263 PRJNA385396_P_NODE_10726_length_276_cov_2.275862_g10634_i0 PRJNA385396 10726 276 2.275862 6.28137912 Opisthokonta 33154 Chaetognatha other_Eukaryota 123 4.26e-34   NR CAL69076.1 52888 g10634 i0 66.7 6.69565217391304 87 29 94.6 0 15 275 4 90 CAL69076.1 TPA: putative 60S ribosomal protein L30 isoform 1 [Spadella cephaloptera] diamond 1848 124 0.991935483870968 Eukaryota Opisthokonta Metazoa Chaetognatha Sagittoidea Phragmophora Spadellidae Spadella Spadella cephaloptera
29365797 29365797 PRJNA385396_P_NODE_7609_length_316_cov_0.950617_g7517_i0 PRJNA385396 7609 316 0.950617 3.00394972 Opisthokonta 33154 Chaetognatha other_Eukaryota 141 1.02e-40   NR CAL69071.1 52888 g7517 i0 69.6 7.84177215189873 92 28 87.3 0 38 313 1 92 CAL69071.1 TPA: putative 60S ribosomal protein L27 isoform 2 [Spadella cephaloptera] diamond 2478 142 0.992957746478873 Eukaryota Opisthokonta Metazoa Chaetognatha Sagittoidea Phragmophora Spadellidae Spadella Spadella cephaloptera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;