RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA385396", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA385396 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27043594 27043594 PRJNA385396_P_NODE_21022_length_241_cov_0.916667_g20930_i0 PRJNA385396 21022 241 0.916667 2.20916747 Catenaria anguillulae PL171 765915 Fungi Fungi 60.5 1.8e-8   NR ORZ37897.1 765915 g20930 i0 43.9 1.0207468879668 82 37 97.1 3 2 235 31 107 ORZ37897.1 ubiquitin carboxyl-terminal hydrolase [Catenaria anguillulae PL171] diamond 246 60.5 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
27738962 27738962 PRJNA385396_P_NODE_17304_length_246_cov_0.890173_g17212_i0 PRJNA385396 17304 246 0.890173 2.18982558 Allomyces macrogynus ATCC 38327 578462 Fungi Fungi 46.2 0.00231   NR KNE59835.1 578462 g17212 i0 40 1.75609756097561 65 38 78 1 242 51 482 546 KNE59835.1 hypothetical protein AMAG_05290 [Allomyces macrogynus ATCC 38327] diamond 432 46.2 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
32351718 32351718 PRJNA385396_P_NODE_12259_length_260_cov_2.122995_g12167_i0 PRJNA385396 12259 260 2.122995 5.519787 Paraphysoderma sedebokerense 1500003 Fungi Fungi 101 5.22e-26   NR KAI9135859.1 1500003 g12167 i0 61.8 2.63076923076923 76 29 87.7 0 232 5 1 76 KAI9135859.1 40S ribosomal protein S21 [Paraphysoderma sedebokerense] diamond 684 101 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
32573207 32573207 PRJNA385396_P_NODE_4799_length_370_cov_0.898990_g4707_i0 PRJNA385396 4799 370 0.89899 3.326263 Allomyces macrogynus ATCC 38327 578462 Fungi Fungi 55.1 7.35e-6   NR KNE70675.1 578462 g4707 i0 41.2 2.01891891891892 68 40 55.1 0 37 240 515 582 KNE70675.1 hypothetical protein AMAG_15432 [Allomyces macrogynus ATCC 38327] diamond 747 55.1 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;