RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA385396", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA385396 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27580665 27580665 PRJNA385396_P_NODE_20064_length_243_cov_0.905882_g19972_i0 PRJNA385396 20064 243 0.905882 2.20129326 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 58.5 6.82e-8   NR TEB19254.1 2494336 g19972 i0 41.3 0.925925925925926 75 41 92.6 1 3 227 160 231 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 225 58.5 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
27976425 27976425 PRJNA385396_P_NODE_20265_length_242_cov_0.911243_g20173_i0 PRJNA385396 20265 242 0.911243 2.20520806 Perkinsus 28000 SAR_Eukaryotes SAR_Eukaryotes 115 6.96e-28   NR KAF4741663.1 32597 g20173 i0 74.3 2.60330578512397 70 18 86.8 0 6 215 1430 1499 KAF4741663.1 nucleoside diphosphate kinase [Perkinsus olseni] diamond 630 116 0.991379310344828 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
30391627 30391627 PRJNA385396_P_NODE_12553_length_258_cov_1.151351_g12461_i0 PRJNA385396 12553 258 1.151351 2.97048558 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 66.2 1.19e-10   NR TEB19254.1 2494336 g12461 i0 43 1.08139534883721 93 45 98.8 2 3 257 61 153 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 279 66.2 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
32225037 32225037 PRJNA385396_P_NODE_7938_length_311_cov_1.294118_g7846_i0 PRJNA385396 7938 311 1.294118 4.02470698 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 82.4 1.01e-15   NR KAF4693773.1 32597 g7846 i0 47.4 6.41479099678457 95 48 90.7 2 283 2 63 156 KAF4693773.1 Protein phosphatase PP2A regulatory subunit B [Perkinsus olseni] diamond 1995 82.4 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;