contig_metadata
14 rows where bioproject = "PRJNA385396", tax_clade = "PVC group" and tax_phylum = "Planctomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2351910 | 2351910 | PRJNA385396_P_NODE_14862_length_249_cov_1.312500_g14770_i0 | PRJNA385396 | 14862 | 249 | 1.3125 | 3.268125 | Isosphaera | 127 | Bacteria | Bacteria | 372 | 1.52e-98 | NTclustered | gi|470487262|ref|NR_076810.1| | 128 | g14770 | i0 | 94.239 | 186.690763052209 | 243 | 14 | 98 | 0 | 1 | 243 | 2429 | 2671 | Isosphaera pallida strain IS1B 23S ribosomal RNA gene, complete sequence | blastn | 46486 | 372 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Isosphaera | Isosphaera pallida | |
| 2957588 | 2957588 | PRJNA385396_P_NODE_17963_length_245_cov_0.895349_g17871_i0 | PRJNA385396 | 17963 | 245 | 0.895349 | 2.19360505 | Phycisphaeraceae bacterium D3-23 | 3004190 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|2727577647|gb|CP114179.1| | 3004190 | g17871 | i0 | 100 | 0.114285714285714 | 28 | 0 | 11 | 0 | 22 | 49 | 949644 | 949617 | Phycisphaeraceae bacterium D3-23 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium D3-23 | ||
| 6784546 | 6784546 | PRJNA385396_P_NODE_16186_length_248_cov_0.880000_g16094_i0 | PRJNA385396 | 16186 | 248 | 0.88 | 2.1824 | Urbifossiella limnaea | 2528023 | Bacteria | Bacteria | 316 | 7.2e-82 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g16094 | i0 | 89.879 | 65.4879032258064 | 247 | 24 | 99 | 1 | 2 | 248 | 2018474 | 2018229 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 16241 | 316 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea | |
| 9334916 | 9334916 | PRJNA385396_P_NODE_13628_length_251_cov_0.865169_g13536_i0 | PRJNA385396 | 13628 | 251 | 0.865169 | 2.17157419 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 115 | 4.89e-28 | NR | MDX2119264.1 | 2026780 | g13536 | i0 | 62.7 | 2.97609561752988 | 83 | 30 | 99.2 | 1 | 2 | 250 | 255 | 336 | MDX2119264.1 NADP-dependent isocitrate dehydrogenase [Planctomycetota bacterium] | diamond | 747 | 115 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 15709898 | 15709898 | PRJNA385396_P_NODE_7193_length_322_cov_1.236948_g7101_i0 | PRJNA385396 | 7193 | 322 | 1.236948 | 3.98297256 | uncultured Planctomycetaceae bacterium | 100233 | Bacteria | Bacteria | 379 | 1.22e-100 | NTclustered | gi|2874254106|emb|OY970189.1| | 100233 | g7101 | i0 | 88.199 | 125.953416149068 | 322 | 33 | 99 | 5 | 2 | 322 | 4317515 | 4317198 | MAG: uncultured Planctomycetaceae bacterium isolate MFD09603.bin.2.127 genome assembly, chromosome: 1 | blastn | 40557 | 379 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 24633616 | 24633616 | PRJNA385396_P_NODE_8860_length_299_cov_1.057522_g8768_i0 | PRJNA385396 | 8860 | 299 | 1.057522 | 3.16199078 | Gemmata sp. SH-PL17 | 1630693 | Bacteria | Bacteria | 392 | 1.44e-104 | NTclustered | gi|1015440974|gb|CP011271.1| | 1630693 | g8768 | i0 | 90.301 | 43.752508361204 | 299 | 29 | 100 | 0 | 1 | 299 | 2666501 | 2666799 | Gemmata sp. SH-PL17, complete genome | blastn | 13082 | 392 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata sp. SH-PL17 | |
| 25302710 | 25302710 | PRJNA385396_P_NODE_11980_length_263_cov_1.621053_g11888_i0 | PRJNA385396 | 11980 | 263 | 1.621053 | 4.26336939 | Gemmata | 113 | Bacteria | Bacteria | 119 | 4.1e-31 | NR | WP_010045460.1 | 114 | g11888 | i0 | 72.3 | 4.7680608365019 | 83 | 22 | 94.7 | 1 | 260 | 12 | 98 | 179 | WP_010045460.1 peptidylprolyl isomerase [Gemmata obscuriglobus] | diamond | 1254 | 119 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata obscuriglobus | |
| 27106655 | 27106655 | PRJNA385396_P_NODE_14922_length_249_cov_0.875000_g14830_i0 | PRJNA385396 | 14922 | 249 | 0.875 | 2.17875 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 79.7 | 3.68e-15 | NR | MBX3403171.1 | 2026777 | g14830 | i0 | 63.6 | 0.662650602409639 | 55 | 20 | 66.3 | 0 | 83 | 247 | 288 | 342 | MBX3403171.1 hypothetical protein [Phycisphaeraceae bacterium] | diamond | 165 | 79.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 28260460 | 28260460 | PRJNA385396_P_NODE_15626_length_248_cov_1.314286_g15534_i0 | PRJNA385396 | 15626 | 248 | 1.314286 | 3.25942928 | PVC group | 1783257 | Bacteria | Bacteria | 86.7 | 1.42e-17 | NR | HMN42288.1 | 2052180 | g15534 | i0 | 54.2 | 7.40322580645161 | 72 | 33 | 87.1 | 0 | 242 | 27 | 1387 | 1458 | HMN42288.1 GC-type dockerin domain-anchored protein [Phycisphaerales bacterium] | diamond | 1836 | 86.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 28591198 | 28591198 | PRJNA385396_P_NODE_18687_length_244_cov_0.900585_g18595_i0 | PRJNA385396 | 18687 | 244 | 0.900585 | 2.1974274 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 55.1 | 1.3e-6 | NR | RPH43679.1 | 2026780 | g18595 | i0 | 65 | 0.491803278688525 | 40 | 13 | 48 | 1 | 5 | 121 | 224 | 263 | RPH43679.1 MAG: hypothetical protein EHM91_08590, partial [Planctomycetota bacterium] | diamond | 120 | 55.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 28811798 | 28811798 | PRJNA385396_P_NODE_13688_length_251_cov_0.865169_g13596_i0 | PRJNA385396 | 13688 | 251 | 0.865169 | 2.17157419 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 116 | 7.09e-29 | NR | MBL8728556.1 | 2026780 | g13596 | i0 | 70.3 | 10.792828685259 | 74 | 22 | 88.4 | 0 | 250 | 29 | 281 | 354 | MBL8728556.1 fatty acid desaturase [Planctomycetota bacterium] | diamond | 2709 | 116 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 29474877 | 29474877 | PRJNA385396_P_NODE_10670_length_277_cov_1.509804_g10578_i0 | PRJNA385396 | 10670 | 277 | 1.509804 | 4.18215708 | Gemmataceae bacterium | 2052164 | Bacteria | Bacteria | 49.3 | 2.89e-4 | NR | HEV3079466.1 | 2052164 | g10578 | i0 | 39.4 | 3.53068592057762 | 66 | 37 | 70.4 | 2 | 77 | 271 | 983 | 1046 | HEV3079466.1 autotransporter-associated beta strand repeat-containing protein [Gemmataceae bacterium] | diamond | 978 | 49.3 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 29727496 | 29727496 | PRJNA385396_P_NODE_19050_length_244_cov_0.900585_g18958_i0 | PRJNA385396 | 19050 | 244 | 0.900585 | 2.1974274 | Planctomycetaceae bacterium | 2026779 | Bacteria | Bacteria | 132 | 3e-35 | NR | MBX3451904.1 | 2026779 | g18958 | i0 | 74.7 | 0.971311475409836 | 79 | 20 | 97.1 | 0 | 239 | 3 | 121 | 199 | MBX3451904.1 Mrp/NBP35 family ATP-binding protein [Planctomycetaceae bacterium] | diamond | 237 | 132 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 31971750 | 31971750 | PRJNA385396_P_NODE_21558_length_241_cov_0.916667_g21466_i0 | PRJNA385396 | 21558 | 241 | 0.916667 | 2.20916747 | Phycisphaera sp. | 2030824 | Bacteria | Bacteria | 61.6 | 3.19e-9 | NR | MBI1337463.1 | 2030824 | g21466 | i0 | 45.3 | 0.796680497925311 | 64 | 33 | 77.2 | 1 | 239 | 54 | 92 | 155 | MBI1337463.1 PEP-CTERM sorting domain-containing protein [Phycisphaera sp.] | diamond | 192 | 61.6 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaera | Phycisphaera sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;