RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA385396" and tax_clade = "Metamonada"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 5 ✖

bioproject 1

  • PRJNA385396 · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14435567 14435567 PRJNA385396_P_NODE_12852_length_255_cov_1.521978_g12760_i0 PRJNA385396 12852 255 1.521978 3.8810439 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 108 2.7300000000000003e-26   NR KAJ4457831.1 342808 g12760 i0 66.7 0.952941176470588 81 26 95.3 1 245 3 76 155 KAJ4457831.1 putative 60S ribosomal protein L18-2 [Paratrimastix pyriformis] diamond 243 108 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
19532668 19532668 PRJNA385396_P_NODE_14076_length_250_cov_1.367232_g13984_i0 PRJNA385396 14076 250 1.367232 3.41808 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.023   NTclustered gi|2794972657|ref|XM_067866685.1| 2049356 g13984 i0 100 0.112 28 0 11 0 182 209 445 418 Monocercomonoides exilis uncharacterized protein (MONOS_13933), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
29064831 29064831 PRJNA385396_P_NODE_6768_length_328_cov_2.113725_g6676_i0 PRJNA385396 6768 328 2.113725 6.933018 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 104 3.35e-26   NR KAG9397047.1 201153 g6676 i0 48 1.84756097560976 98 50 89.6 1 299 6 19 115 KAG9397047.1 Ribosomal protein S12e [Carpediemonas membranifera] diamond 606 104 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
30075078 30075078 PRJNA385396_P_NODE_9812_length_286_cov_2.169014_g9720_i0 PRJNA385396 9812 286 2.169014 6.20338004 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 153 1.7e-45   NR KAJ5080793.1 1746090 g9720 i0 73.7 3.9020979020979 95 25 99.7 0 285 1 26 120 KAJ5080793.1 40S ribosomal protein S11 [Anaeramoeba ignava] diamond 1116 153 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
32225035 32225035 PRJNA385396_P_NODE_15458_length_249_cov_0.875000_g15366_i0 PRJNA385396 15458 249 0.875 2.17875 Streblomastix strix 222440 Preaxostyla other_Eukaryota 59.3 2.29e-8   NR KAA6391610.1 222440 g15366 i0 36.3 0.963855421686747 80 49 96.4 1 2 241 49 126 KAA6391610.1 MAG: putative Vacuolar protein-sorting-associated protein 25 [Streblomastix strix] diamond 240 59.3 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;