RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA385396" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 2 ✖

bioproject 1

  • PRJNA385396 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22083272 22083272 PRJNA385396_P_NODE_15878_length_248_cov_0.880000_g15786_i0 PRJNA385396 15878 248 0.88 2.1824 Brasilonema sennae 1397703 Bacteria Bacteria 207 4.52e-49   NTclustered gi|1702166658|gb|CP030118.1| 415709 g15786 i0 82.969 3.83870967741935 229 39 92 0 14 242 3726393 3726165 Brasilonema sennae CENA114 chromosome blastn 952 207 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Scytonemataceae Brasilonema Brasilonema sennae
28906630 28906630 PRJNA385396_P_NODE_20888_length_242_cov_0.881657_g20796_i0 PRJNA385396 20888 242 0.881657 2.13360994 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 152 1.3699999999999996e-40   NR MBX9687865.1 2364082 g20796 i0 95 0.991735537190083 80 4 99.2 0 1 240 791 870 MBX9687865.1 diguanylate cyclase [Candidatus Obscuribacterales bacterium] diamond 240 152 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;