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contig_metadata

18 rows where bioproject = "PRJNA385396" and tax_clade = "Amoebozoa"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 18 ✖

bioproject 1

  • PRJNA385396 · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2957487 2957487 PRJNA385396_P_NODE_13823_length_251_cov_0.865169_g13731_i0 PRJNA385396 13823 251 0.865169 2.17157419 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 69.7 4.01e-12   NR PRP88321.1 1890364 g13731 i0 52.1 0.872509960159363 73 34 86.1 1 246 31 89 161 PRP88321.1 vacuolar H+-ATPase E subunit [Planoprotostelium fungivorum] diamond 219 69.7 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
2957839 2957839 PRJNA385396_P_NODE_6843_length_327_cov_1.814961_g6751_i0 PRJNA385396 6843 327 1.814961 5.93492247 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 161 2.6999999999999998e-48   NR PRP74141.1 1890364 g6751 i0 88.9 1.77064220183486 90 10 82.6 0 272 3 40 129 PRP74141.1 histone H2A [Planoprotostelium fungivorum] diamond 579 161 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
6784683 6784683 PRJNA385396_P_NODE_21866_length_232_cov_4.855346_g21774_i0 PRJNA385396 21866 232 4.855346 11.26440272 Heterostelium pallidum 13642 Evosea other_Eukaryota 65.8 2.66e-6   NTclustered gi|85062630|gb|DQ340388.1| 13642 g21774 i0 97.368 0.689655172413793 38 1 16 0 99 136 13482 13445 Polysphondylium pallidum 17S ribosomal RNA, 5.8S ribosomal RNA, 26S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence blastn 160 65.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium pallidum
9335047 9335047 PRJNA385396_P_NODE_19028_length_244_cov_0.900585_g18936_i0 PRJNA385396 19028 244 0.900585 2.1974274 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 206 1.6e-48   NTclustered gi|470456539|ref|XM_004341020.1| 1257118 g18936 i0 82.7 5.9016393442623 237 35 97 4 1 237 108 338 Acanthamoeba castellanii str. Neff polyadenylate-binding protein family protein (ACA1_234620), partial mRNA blastn 1440 206 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9335222 9335222 PRJNA385396_P_NODE_5508_length_353_cov_1.053571_g5416_i0 PRJNA385396 5508 353 1.053571 3.71910563 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 82 1.29e-15   NR AFD36233.1 5755 g5416 i0 54.3 0.594900849858357 70 32 59.5 0 212 3 69 138 AFD36233.1 protein kinase C4, partial [Acanthamoeba castellanii] diamond 210 82 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26758600 26758600 PRJNA385396_P_NODE_12381_length_259_cov_1.655914_g12289_i0 PRJNA385396 12381 259 1.655914 4.28881726 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 85.9 2.74e-17   NR PRP88780.1 1890364 g12289 i0 74.1 0.671814671814672 58 15 67.2 0 176 3 75 132 PRP88780.1 citrate synthase, mitochondrial [Planoprotostelium fungivorum] diamond 174 85.9 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
27264937 27264937 PRJNA385396_P_NODE_5203_length_359_cov_1.076923_g5111_i0 PRJNA385396 5203 359 1.076923 3.86615357 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 66.6 5.81e-10   NR PRP76449.1 1890364 g5111 i0 38.7 0.885793871866295 106 60 88.6 1 318 1 165 265 PRP76449.1 hypothetical protein PROFUN_12061 [Planoprotostelium fungivorum] diamond 318 66.6 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
28275238 28275238 PRJNA385396_P_NODE_19806_length_243_cov_0.905882_g19714_i0 PRJNA385396 19806 243 0.905882 2.20129326 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 67.4 7.47e-11   NR KYR00992.1 361077 g19714 i0 48.4 1.58024691358025 64 31 79 1 199 8 1 62 KYR00992.1 hypothetical protein DLAC_02069 [Tieghemostelium lacteum] diamond 384 67.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
28306946 28306946 PRJNA385396_P_NODE_9526_length_290_cov_1.064516_g9434_i0 PRJNA385396 9526 290 1.064516 3.0870964 Polysphondylium violaceum 133409 Evosea other_Eukaryota 64.7 1.03e-9   NR KAF2073311.1 133409 g9434 i0 50.9 1.13793103448276 55 26 55.9 1 126 287 168 222 KAF2073311.1 hypothetical protein CYY_005364 [Polysphondylium violaceum] diamond 330 64.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
31212223 31212223 PRJNA385396_P_NODE_455_length_986_cov_3.928806_g389_i0 PRJNA385396 455 986 3.928806 38.73802716 Polysphondylium violaceum 133409 Evosea other_Eukaryota 238 9.36e-73   NR KAF2073311.1 133409 g389 i0 40.8 1.96551724137931 338 165 96.8 9 7 960 16 338 KAF2073311.1 hypothetical protein CYY_005364 [Polysphondylium violaceum] diamond 1938 238 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
31371020 31371020 PRJNA385396_P_NODE_17996_length_245_cov_0.895349_g17904_i0 PRJNA385396 17996 245 0.895349 2.19360505 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 86.3 1.31e-17   NR XP_004336458.1 1257118 g17904 i0 53.8 0.795918367346939 65 27 79.6 1 17 211 22 83 XP_004336458.1 Aga27A, putative [Acanthamoeba castellanii str. Neff] diamond 195 86.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31465902 31465902 PRJNA385396_P_NODE_20476_length_242_cov_0.911243_g20384_i0 PRJNA385396 20476 242 0.911243 2.20520806 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 95.9 7.04e-21   NR KYQ99716.1 361077 g20384 i0 51.3 1.98347107438017 80 39 99.2 0 242 3 142 221 KYQ99716.1 WD40 repeat-containing protein [Tieghemostelium lacteum] diamond 480 95.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
31560789 31560789 PRJNA385396_P_NODE_6936_length_326_cov_1.094862_g6844_i0 PRJNA385396 6936 326 1.094862 3.56925012 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 123 2.4199999999999997e-30   NR PRP88500.1 1890364 g6844 i0 57.7 0.957055214723926 104 42 95.7 1 15 326 419 520 PRP88500.1 hypothetical protein PROFUN_03217 [Planoprotostelium fungivorum] diamond 312 123 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31781818 31781818 PRJNA385396_P_NODE_20977_length_241_cov_1.375000_g20885_i0 PRJNA385396 20977 241 1.375 3.31375 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 67 3.76e-11   NR XP_004340537.1 1257118 g20885 i0 41.6 0.95850622406639 77 43 93.4 1 233 9 46 122 XP_004340537.1 clavaldehyde dehydrogenase [Acanthamoeba castellanii str. Neff] diamond 231 67 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31781820 31781820 PRJNA385396_P_NODE_7517_length_317_cov_1.262295_g7425_i0 PRJNA385396 7517 317 1.262295 4.00147515 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 57 8.45e-7   NR PRP75486.1 1890364 g7425 i0 38.7 0.8801261829653 93 54 88 2 290 12 6 95 PRP75486.1 hypothetical protein PROFUN_10664 [Planoprotostelium fungivorum] diamond 279 57 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32098329 32098329 PRJNA385396_P_NODE_9938_length_285_cov_1.415094_g9846_i0 PRJNA385396 9938 285 1.415094 4.0330179 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 147 2.48e-39   NR PRP86558.1 1890364 g9846 i0 76.4 0.936842105263158 89 21 93.7 0 19 285 442 530 PRP86558.1 ribosomal protein S18 isoform 1 [Planoprotostelium fungivorum] diamond 267 147 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32400157 32400157 PRJNA385396_P_NODE_6039_length_341_cov_1.149254_g5947_i0 PRJNA385396 6039 341 1.149254 3.91895614 Eumycetozoa 142796 Evosea other_Eukaryota 136 1.85e-34   NR KAF2076696.1 133409 g5947 i0 58.9 5.91202346041056 112 46 98.5 0 338 3 225 336 KAF2076696.1 hypothetical protein CYY_002009 [Polysphondylium violaceum] diamond 2016 137 0.992700729927007 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
32573204 32573204 PRJNA385396_P_NODE_13839_length_251_cov_0.865169_g13747_i0 PRJNA385396 13839 251 0.865169 2.17157419 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 67.8 6.12e-11   NR KYQ88534.1 361077 g13747 i0 55.9 0.812749003984064 68 30 81.3 0 3 206 284 351 KYQ88534.1 hypothetical protein DLAC_11845 [Tieghemostelium lacteum] diamond 204 67.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;