RNAquarium Metadata Server
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contig_metadata

12 rows where bioproject = "PRJNA385073", tax_phylum = "Preplasmiviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 12 ✖

tax_phylum 1

  • Preplasmiviricota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJNA385073 · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2351485 2351485 PRJNA385073_P_NODE_26062_length_290_cov_2.281106_g25900_i0 PRJNA385073 26062 290 2.281106 6.6152074 root 1 Root_unresolved Root_unresolved 536 6.079999999999999e-148   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g25900 i0 100 100 290 0 100 0 1 290 13379 13090 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 29000 536 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
3627207 3627207 PRJNA385073_P_NODE_65243_length_199_cov_12.746032_g65081_i0 PRJNA385073 65243 199 12.746032 25.36460368 root 1 Root_unresolved Root_unresolved 366 5.43e-97   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g65081 i0 100 99.4974874371859 198 0 99 0 1 198 16191 16388 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 19800 366 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
8728880 8728880 PRJNA385073_P_NODE_34167_length_267_cov_6.278351_g34005_i0 PRJNA385073 34167 267 6.278351 16.76319717 root 1 Root_unresolved Root_unresolved 494 3.38e-135   NTclustered gi|2620236085|gb|OR777220.1| 10515 g34005 i0 100 100 267 0 100 0 1 267 16187 15921 Human adenovirus 2 isolate HAdV-C2/USA/13R1/2017, complete genome blastn 26700 494 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
10004632 10004632 PRJNA385073_P_NODE_6928_length_471_cov_2.409548_g6768_i0 PRJNA385073 6928 471 2.409548 11.34897108 root 1 Root_unresolved Root_unresolved 870 0   NTclustered gi|15485521|emb|AJ293908.1| 10515 g6768 i0 100 100 471 0 100 0 1 471 1182 1652 Human adenovirus type 2 penton gene, isolate 352 blastn 47100 870 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
11279725 11279725 PRJNA385073_P_NODE_9929_length_408_cov_1.979104_g9768_i0 PRJNA385073 9929 408 1.979104 8.07474432 root 1 Root_unresolved Root_unresolved 754 0   NTclustered gi|56160492|ref|AC_000007.1| 10515 g9768 i0 100 100 408 0 100 0 1 408 12168 11761 Human adenovirus 2, complete genome blastn 40800 754 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
12555139 12555139 PRJNA385073_P_NODE_64790_length_204_cov_4.824427_g64628_i0 PRJNA385073 64790 204 4.824427 9.84183108 Mastadenovirus 10509 Viruses Viruses 377 2.59e-100   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g64628 i0 100 100 204 0 100 0 1 204 16781 16578 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 20400 377 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
18927640 18927640 PRJNA385073_P_NODE_28015_length_284_cov_3.075829_g27853_i0 PRJNA385073 28015 284 3.075829 8.73535436 root 1 Root_unresolved Root_unresolved 525 1.2899999999999994e-144   NTclustered gi|2620236085|gb|OR777220.1| 10515 g27853 i0 100 100 284 0 100 0 1 284 15290 15007 Human adenovirus 2 isolate HAdV-C2/USA/13R1/2017, complete genome blastn 28400 525 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
25302435 25302435 PRJNA385073_P_NODE_41080_length_251_cov_1.921348_g40918_i0 PRJNA385073 41080 251 1.921348 4.82258348 root 1 Root_unresolved Root_unresolved 464 2.47e-126   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g40918 i0 100 100 251 0 100 0 1 251 12839 13089 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 25100 464 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
27675700 27675700 PRJNA385073_P_NODE_44144_length_250_cov_0.870056_g43982_i0 PRJNA385073 44144 250 0.870056 2.17514 Pimephales minnow adintovirus 2609864 Viruses Viruses 86.3 3.66e-18   NR DAC81396.1 2609864 g43982 i0 54.9 0.984 82 37 98.4 0 247 2 7 88 DAC81396.1 TPA_asm: acintoc2 [Pimephales minnow adintovirus] diamond 246 86.3 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus
29538213 29538213 PRJNA385073_P_NODE_30890_length_276_cov_2.753695_g30728_i0 PRJNA385073 30890 276 2.753695 7.6001982 Pimephales minnow adintovirus 2609864 Viruses Viruses 54.7 3.39e-6   NR DAC81393.1 2609864 g30728 i0 54.5 2.30434782608696 55 17 54.3 2 173 24 250 301 DAC81393.1 TPA_asm: PolB-C [Pimephales minnow adintovirus] diamond 636 54.7 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus
30580504 30580504 PRJNA385073_P_NODE_50073_length_246_cov_0.890173_g49911_i0 PRJNA385073 50073 246 0.890173 2.18982558 Adintovirus homo33 3115912 Viruses Viruses 102 2.0899999999999994e-23   NR DBA48451.1 3115912 g49911 i0 58 0.98780487804878 81 34 98.8 0 2 244 15 95 DBA48451.1 MAG TPA_asm: Hexon [Adintovirus homo3309] diamond 243 102 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus homo3309
31086281 31086281 PRJNA385073_P_NODE_43815_length_250_cov_0.870056_g43653_i0 PRJNA385073 43815 250 0.870056 2.17514 Mayetiola barley midge adintovirus 2609858 Viruses Viruses 68.6 3.12e-11   NR YP_010796966.1 2609858 g43653 i0 45.9 2.508 74 33 88.8 2 29 250 349 415 YP_010796966.1 PLA2X-adenain [Mayetiola barley midge adintovirus] diamond 627 68.6 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Amphintovirales Eupolintoviridae Alphadintovirus Alphadintovirus mayetiola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;