RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA385073" and tax_phylum = "Pisuviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA385073 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8059468 8059468 PRJNA385073_P_NODE_46667_length_248_cov_0.880000_g46505_i0 PRJNA385073 46667 248 0.88 2.1824 Polerovirus TUYV 3431793 Viruses Viruses 448 2.4499999999999996e-121   NTclustered gi|336444814|gb|JN015068.1| 1046403 g46505 i0 99.194 99.7943548387097 248 2 100 0 1 248 2384 2137 Brassica yellows virus, complete genome blastn 24749 448 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae Polerovirus Polerovirus TUYV
18258060 18258060 PRJNA385073_P_NODE_63295_length_221_cov_5.560811_g63133_i0 PRJNA385073 63295 221 5.560811 12.28939231 Lentinula eaodes hypovirus 2 2992848 Viruses Viruses 359 1.03e-94   NTclustered gi|2324991072|gb|OK636212.1| 2992848 g63133 i0 95.928 1 221 9 100 0 1 221 4982 5202 Lentinula eaodes hypovirus 2 isolate LED2-8 RNA-dependent RNA polymerase (RdRp) gene, complete cds blastn 221 359 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Hypoviridae Hypovirus Lentinula eaodes hypovirus 2
24632343 24632343 PRJNA385073_P_NODE_34340_length_267_cov_1.829897_g34178_i0 PRJNA385073 34340 267 1.829897 4.88582499 Sichuan mamastrovirus 11 2933222 Viruses Viruses 215 2.94e-51   NTclustered gi|2203408192|gb|MW784105.1| 2933222 g34178 i0 86.911 31.1647940074906 191 25 72 0 77 267 194 4 MAG: Sichuan mamastrovirus 11 isolate R69-151373, complete genome blastn 8321 215 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae Mamastrovirus Sichuan mamastrovirus 11
28401652 28401652 PRJNA385073_P_NODE_36926_length_261_cov_1.425532_g36764_i0 PRJNA385073 36926 261 1.425532 3.72063852 Lentinula eaodes hypovirus 2 2992848 Viruses Viruses 161 7.9e-44   NR UZA97544.1 2992848 g36764 i0 98.8 0.977011494252874 85 1 97.7 0 2 256 1565 1649 UZA97544.1 RNA-dependent RNA polymerase [Lentinula eaodes hypovirus 2] diamond 255 161 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Hypoviridae Hypovirus Lentinula eaodes hypovirus 2

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;