RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA385073" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA385073 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24632744 24632744 PRJNA385073_P_NODE_55140_length_243_cov_0.905882_g54978_i0 PRJNA385073 55140 243 0.905882 2.20129326 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 165 4.8e-47   NR HPI21258.1 2447898 g54978 i0 100 1 81 0 100 0 243 1 33 113 HPI21258.1 pitrilysin family protein [Candidatus Kapaibacterium sp.] diamond 243 165 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
30485991 30485991 PRJNA385073_P_NODE_50413_length_246_cov_0.890173_g50251_i0 PRJNA385073 50413 246 0.890173 2.18982558 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 175 6.71e-49   NR MDD3124775.1 2447898 g50251 i0 100 0.98780487804878 81 0 98.8 0 2 244 123 203 MDD3124775.1 OmpA family protein [Candidatus Kapaibacterium sp.] diamond 243 175 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
30485995 30485995 PRJNA385073_P_NODE_53493_length_244_cov_0.900585_g53331_i0 PRJNA385073 53493 244 0.900585 2.1974274 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 156 2.8899999999999995e-42   NR MDD3124989.1 2447898 g53331 i0 100 0.983606557377049 80 0 98.4 0 242 3 635 714 MDD3124989.1 ferrous iron transport protein B [Candidatus Kapaibacterium sp.] diamond 240 156 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
32761849 32761849 PRJNA385073_P_NODE_60080_length_238_cov_2.666667_g59918_i0 PRJNA385073 60080 238 2.666667 6.34666746 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 104 4.57e-24   NR HVK57421.1 2447898 g59918 i0 63.3 0.995798319327731 79 28 99.6 1 2 238 418 495 HVK57421.1 DNA primase [Candidatus Kapaibacterium sp.] diamond 237 104 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;