RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA385073" and tax_phylum = "Candidatus Dormiibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA385073 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26790480 26790480 PRJNA385073_P_NODE_54661_length_243_cov_1.641176_g54499_i0 PRJNA385073 54661 243 1.641176 3.98805768 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 64.7 2.19e-10   NR HVB86534.1 2052315 g54499 i0 43.8 0.987654320987654 80 44 97.5 1 1 237 23 102 HVB86534.1 hypothetical protein [Candidatus Dormiibacterota bacterium] diamond 240 64.7 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
28843502 28843502 PRJNA385073_P_NODE_26508_length_289_cov_1.425926_g26346_i0 PRJNA385073 26508 289 1.425926 4.12092614 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 43.9 0.0258   NR HZS14039.1 2052315 g26346 i0 30.4 0.955017301038062 92 59 95.5 2 13 288 122 208 HZS14039.1 ABC transporter permease [Candidatus Dormiibacterota bacterium] diamond 276 43.9 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
29744371 29744371 PRJNA385073_P_NODE_34370_length_267_cov_1.587629_g34208_i0 PRJNA385073 34370 267 1.587629 4.23896943 Bacteria 2 Bacteria Bacteria 127 3.05e-34   NR HWN17055.1 2052315 g34208 i0 70.6 4.74157303370786 85 25 95.5 0 266 12 117 201 HWN17055.1 GNAT family N-acetyltransferase [Candidatus Dormiibacterota bacterium] diamond 1266 128 0.9921875 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;