RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA385073" and tax_phylum = "Candidatus Adleribacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Adleribacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA385073 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32336934 32336934 PRJNA385073_P_NODE_49259_length_246_cov_2.543353_g49097_i0 PRJNA385073 49259 246 2.543353 6.25664838 Pseudomonadati 3379134 Bacteria Bacteria 100 1.06e-22   NR OGC78768.1 1797239 g49097 i0 67.1 2.84146341463415 76 25 92.7 0 230 3 255 330 OGC78768.1 MAG: hypothetical protein A2852_02955 [Candidatus Adlerbacteria bacterium RIFCSPHIGHO2_01_FULL_54_23] diamond 699 101 0.99009900990099 Bacteria Bacteria candidate phyla   Candidatus Adleribacteriota         Candidatus Adlerbacteria bacterium RIFCSPHIGHO2_01_FULL_54_23

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;