RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA385073" and tax_phylum = "Caldisericota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Caldisericota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA385073 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1680857 1680857 PRJNA385073_P_NODE_38082_length_258_cov_1.664865_g37920_i0 PRJNA385073 38082 258 1.664865 4.2953517 Caldisericia bacterium 2758719 Bacteria Bacteria 76.8 1.39e-9   NTclustered gi|2621713026|emb|OY771555.1| 2758719 g37920 i0 92.453 0.662790697674419 53 4 21 0 35 87 2148651 2148703 MAG: Caldisericia bacterium isolate 048577e4-24bb-4769-bfae-6f43d69425f4 genome assembly, chromosome: 1 blastn 171 76.8 1 Bacteria Caldisericota/Cryosericota group Pseudomonadati Caldisericota Caldisericia       Caldisericia bacterium
27517607 27517607 PRJNA385073_P_NODE_61263_length_233_cov_2.462500_g61101_i0 PRJNA385073 61263 233 2.4625 5.737625 Caldisericia bacterium 2758719 Bacteria Bacteria 89.7 2.52e-20   NR HQJ57168.1 2758719 g61101 i0 60.5 0.978540772532189 76 30 97.9 0 2 229 103 178 HQJ57168.1 hypothetical protein [Caldisericia bacterium] diamond 228 89.7 1 Bacteria Caldisericota/Cryosericota group Pseudomonadati Caldisericota Caldisericia       Caldisericia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;