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contig_metadata

26 rows where bioproject = "PRJNA385073" and tax_phylum = "Bdellovibrionota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bdellovibrionota · 26 ✖

tax_kingdom 1

bioproject 1

  • PRJNA385073 · 26 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6783496 6783496 PRJNA385073_P_NODE_28586_length_283_cov_1.276190_g28424_i0 PRJNA385073 28586 283 1.27619 3.6116177 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 132 1.94e-33   NR MDR3607015.1 2599941 g28424 i0 61.7 1.99293286219081 94 36 99.6 0 2 283 340 433 MDR3607015.1 isoleucine--tRNA ligase [Oligoflexia bacterium] diamond 564 133 0.992481203007519 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia       Oligoflexia bacterium
6784262 6784262 PRJNA385073_P_NODE_63666_length_217_cov_4.020833_g63504_i0 PRJNA385073 63666 217 4.020833 8.72520761 Bdellovibrio bacteriovorus 959 Bacteria Bacteria 159 1.1e-34   NTclustered gi|2800924434|gb|CP168967.1| 959 g63504 i0 80.476 33.8110599078341 210 39 96 2 9 217 2323809 2323601 Bdellovibrio bacteriovorus strain Bd4 chromosome, complete genome blastn 7337 159 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus
9333807 9333807 PRJNA385073_P_NODE_26128_length_290_cov_1.672811_g25966_i0 PRJNA385073 26128 290 1.672811 4.8511519 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 180 4.06e-51   NR MES2768523.1 3034175 g25966 i0 87.5 0.993103448275862 96 12 99.3 0 290 3 260 355 MES2768523.1 primosomal protein N' [Bdellovibrionota bacterium] diamond 288 180 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
26948525 26948525 PRJNA385073_P_NODE_54782_length_243_cov_1.288235_g54620_i0 PRJNA385073 54782 243 1.288235 3.13041105 Pseudobdellovibrionaceae bacterium 2026715 Bacteria Bacteria 132 7.91e-34   NR MCM2281156.1 2026715 g54620 i0 80 0.987654320987654 80 16 98.8 0 3 242 263 342 MCM2281156.1 beta-N-acetylhexosaminidase [Pseudobdellovibrionaceae bacterium] diamond 240 132 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
27106642 27106642 PRJNA385073_P_NODE_53242_length_244_cov_0.900585_g53080_i0 PRJNA385073 53242 244 0.900585 2.1974274 Oligoflexia bacterium 2599941 Bacteria Bacteria 112 2.58e-29   NR GIL18072.1 2599941 g53080 i0 64.6 0.971311475409836 79 28 97.1 0 242 6 56 134 GIL18072.1 MAG: hypothetical protein BroJett040_18230 [Oligoflexia bacterium] diamond 237 112 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia       Oligoflexia bacterium
27580657 27580657 PRJNA385073_P_NODE_62264_length_228_cov_3.696774_g62102_i0 PRJNA385073 62264 228 3.696774 8.42864472 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 75.1 1e-13   NR MEK6772466.1 3034175 g62102 i0 56.3 0.934210526315789 71 31 93.4 0 16 228 1 71 MEK6772466.1 hypothetical protein [Bdellovibrionota bacterium] diamond 213 75.1 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
27738949 27738949 PRJNA385073_P_NODE_56984_length_242_cov_0.911243_g56822_i0 PRJNA385073 56984 242 0.911243 2.20520806 Pseudobdellovibrionaceae bacterium 2026715 Bacteria Bacteria 72.4 1.72e-13   NR MCM2281623.1 2026715 g56822 i0 48.6 0.892561983471074 72 36 88 1 3 215 51 122 MCM2281623.1 hypothetical protein [Pseudobdellovibrionaceae bacterium] diamond 216 72.4 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
28622810 28622810 PRJNA385073_P_NODE_34587_length_266_cov_3.984456_g34425_i0 PRJNA385073 34587 266 3.984456 10.59865296 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 124 2.53e-32   NR HEX4924925.1 2053517 g34425 i0 62.1 0.981203007518797 87 33 98.1 0 4 264 138 224 HEX4924925.1 M14 family metallopeptidase [Bdellovibrionales bacterium] diamond 261 124 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
28686031 28686031 PRJNA385073_P_NODE_28587_length_283_cov_1.257143_g28425_i0 PRJNA385073 28587 283 1.257143 3.55771469 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 105 6.97e-24   NR HEY8278715.1 3034175 g28425 i0 49.5 1.00706713780919 95 47 99.6 1 2 283 418 512 HEY8278715.1 transglutaminase domain-containing protein [Bdellovibrionota bacterium] diamond 285 105 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
29064814 29064814 PRJNA385073_P_NODE_37108_length_260_cov_2.994652_g36946_i0 PRJNA385073 37108 260 2.994652 7.7860952 Pseudobdellovibrionaceae bacterium 2026715 Bacteria Bacteria 105 1.6099999999999997e-24   NR MCM2282510.1 2026715 g36946 i0 62.8 0.992307692307692 86 32 99.2 0 1 258 182 267 MCM2282510.1 chorismate-binding protein [Pseudobdellovibrionaceae bacterium] diamond 258 105 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
29569796 29569796 PRJNA385073_P_NODE_38970_length_256_cov_1.677596_g38808_i0 PRJNA385073 38970 256 1.677596 4.29464576 Pseudobdellovibrionaceae bacterium 2026715 Bacteria Bacteria 85.5 4.38e-19   NR MCM2280868.1 2026715 g38808 i0 49.4 0.99609375 85 38 93.8 1 252 13 41 125 MCM2280868.1 hypothetical protein [Pseudobdellovibrionaceae bacterium] diamond 255 85.5 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
30012162 30012162 PRJNA385073_P_NODE_60711_length_235_cov_3.049383_g60549_i0 PRJNA385073 60711 235 3.049383 7.16605005 Pseudobdellovibrionaceae bacterium 2026715 Bacteria Bacteria 142 2.21e-38   NR MCM2282002.1 2026715 g60549 i0 88.5 0.995744680851064 78 9 99.6 0 234 1 397 474 MCM2282002.1 dihydrolipoyl dehydrogenase [Pseudobdellovibrionaceae bacterium] diamond 234 142 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
30012166 30012166 PRJNA385073_P_NODE_65011_length_202_cov_4.325581_g64849_i0 PRJNA385073 65011 202 4.325581 8.73767362 Halobacteriovoraceae bacterium 2026745 Bacteria Bacteria 53.1 4.57e-6   NR MAW07942.1 2026745 g64849 i0 49.2 0.876237623762376 59 30 87.6 0 14 190 123 181 MAW07942.1 hypothetical protein [Halobacteriovoraceae bacterium] diamond 177 53.1 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Halobacteriovoraceae   Halobacteriovoraceae bacterium
30265082 30265082 PRJNA385073_P_NODE_26312_length_290_cov_0.898618_g26150_i0 PRJNA385073 26312 290 0.898618 2.6059922 Micavibrio aeruginosavorus 349221 Bacteria Bacteria 75.1 2.71e-14   NR PZQ46217.1 349221 g26150 i0 56.5 1.48965517241379 69 30 71.4 0 56 262 5 73 PZQ46217.1 MAG: hypothetical protein DI551_05565 [Micavibrio aeruginosavorus] diamond 432 75.1 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio aeruginosavorus
30296845 30296845 PRJNA385073_P_NODE_54372_length_243_cov_3.441176_g54210_i0 PRJNA385073 54372 243 3.441176 8.36205768 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 97.1 1.24e-22   NR MBA2404886.1 2053517 g54210 i0 62.5 0.987654320987654 80 30 98.8 0 241 2 84 163 MBA2404886.1 hypothetical protein [Bdellovibrionales bacterium] diamond 240 97.1 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
30471385 30471385 PRJNA385073_P_NODE_27133_length_287_cov_1.691589_g26971_i0 PRJNA385073 27133 287 1.691589 4.85486043 Bdellovibrio 958 Bacteria Bacteria 113 4.03e-30   NR WP_061834347.1 959 g26971 i0 60.7 3.66898954703833 89 35 93 0 19 285 2 90 WP_061834347.1 PilZ domain-containing protein [Bdellovibrio bacteriovorus] diamond 1053 113 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus
30485996 30485996 PRJNA385073_P_NODE_56113_length_242_cov_2.603550_g55951_i0 PRJNA385073 56113 242 2.60355 6.300591 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 66.6 4.94e-11   NR MBX3022149.1 2053517 g55951 i0 78 1.04132231404959 41 9 50.8 0 3 125 190 230 MBX3022149.1 response regulator [Bdellovibrionales bacterium] diamond 252 66.6 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
30801819 30801819 PRJNA385073_P_NODE_40374_length_253_cov_1.327778_g40212_i0 PRJNA385073 40374 253 1.327778 3.35927834 Oligoflexia bacterium 2599941 Bacteria Bacteria 105 4.85e-24   NR GIL17310.1 2599941 g40212 i0 54.8 0.99604743083004 84 38 99.6 0 252 1 225 308 GIL17310.1 MAG: ATP-dependent DNA helicase RecG [Oligoflexia bacterium] diamond 252 105 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia       Oligoflexia bacterium
31433958 31433958 PRJNA385073_P_NODE_38416_length_257_cov_2.385870_g38254_i0 PRJNA385073 38416 257 2.38587 6.1316859 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 146 3.0499999999999993e-40   NR HMN67674.1 2053517 g38254 i0 80 0.992217898832685 85 17 99.2 0 2 256 274 358 HMN67674.1 formate-dependent phosphoribosylglycinamide formyltransferase [Bdellovibrionales bacterium] diamond 255 146 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
31497471 31497471 PRJNA385073_P_NODE_46576_length_248_cov_0.880000_g46414_i0 PRJNA385073 46576 248 0.88 2.1824 Oligoflexia bacterium 2599941 Bacteria Bacteria 131 3.45e-34   NR MDZ4677387.1 2599941 g46414 i0 80.2 0.979838709677419 81 16 98 0 248 6 377 457 MDZ4677387.1 cystathionine beta-synthase [Oligoflexia bacterium] diamond 243 131 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia       Oligoflexia bacterium
31971730 31971730 PRJNA385073_P_NODE_45798_length_249_cov_0.869318_g45636_i0 PRJNA385073 45798 249 0.869318 2.16460182 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 43.1 0.0296   NR MCB0403606.1 2053517 g45636 i0 37 0.975903614457831 81 46 96.4 2 242 3 320 396 MCB0403606.1 transcription-repair coupling factor [Bdellovibrionales bacterium] diamond 243 43.1 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
31971737 31971737 PRJNA385073_P_NODE_56198_length_242_cov_1.822485_g56036_i0 PRJNA385073 56198 242 1.822485 4.4104137 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 68.2 1.93e-11   NR NQZ18541.1 2053517 g56036 i0 45.7 3.39669421487603 70 38 86.8 0 238 29 82 151 NQZ18541.1 hypothetical protein [Bdellovibrionales bacterium] diamond 822 68.2 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32003497 32003497 PRJNA385073_P_NODE_62878_length_226_cov_2.562092_g62716_i0 PRJNA385073 62878 226 2.562092 5.79032792 Bdellovibrio sp. 28201 Bacteria Bacteria 117 5.34e-29   NR MEN0058081.1 28201 g62716 i0 70.3 7.83185840707965 74 22 98.2 0 3 224 195 268 MEN0058081.1 MFS transporter [Bdellovibrio sp.] diamond 1770 117 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp.
32351697 32351697 PRJNA385073_P_NODE_36279_length_262_cov_2.312169_g36117_i0 PRJNA385073 36279 262 2.312169 6.05788278 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 135 2.04e-36   NR MFA5583960.1 2081706 g36117 i0 66.7 0.961832061068702 84 28 96.2 0 9 260 133 216 MFA5583960.1 hypothetical protein [Bacteriovoracaceae bacterium] diamond 252 135 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
32414914 32414914 PRJNA385073_P_NODE_64879_length_203_cov_4.923077_g64717_i0 PRJNA385073 64879 203 4.923077 9.99384631 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 126 9.94e-36   NR HMN67470.1 2053517 g64717 i0 79.1 0.990147783251232 67 14 99 0 203 3 55 121 HMN67470.1 DUF3307 domain-containing protein [Bdellovibrionales bacterium] diamond 201 126 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32635656 32635656 PRJNA385073_P_NODE_41160_length_251_cov_1.719101_g40998_i0 PRJNA385073 41160 251 1.719101 4.31494351 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 90.1 8.62e-20   NR MBS1958980.1 2053517 g40998 i0 87.5 0.573705179282869 48 6 57.4 0 248 105 203 250 MBS1958980.1 hypothetical protein [Bdellovibrionales bacterium] diamond 144 90.1 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;