RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA385073", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA385073 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31577533 31577533 PRJNA385073_P_NODE_48856_length_247_cov_0.885057_g48694_i0 PRJNA385073 48856 247 0.885057 2.18609079 Opisthokonta 33154 Fungi Fungi 80.9 1.34e-16   NR KAJ9088266.1 34485 g48694 i0 45.1 4.9919028340081 82 42 99.6 1 1 246 74 152 KAJ9088266.1 Ras- protein Rab-18 [Entomophthora muscae] diamond 1233 81.6 0.991421568627451 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Entomophthora Entomophthora muscae
31592346 31592346 PRJNA385073_P_NODE_16756_length_339_cov_1.447368_g16595_i0 PRJNA385073 16756 339 1.447368 4.90657752 Neoconidiobolus thromboides FSU 785 1314799 Fungi Fungi 55.5 3.22e-6   NR KAI9295968.1 1314799 g16595 i0 61.5 3.23893805309735 39 15 34.5 0 187 303 258 296 KAI9295968.1 DUF1295-domain-containing protein [Neoconidiobolus thromboides FSU 785] diamond 1098 55.5 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Ancylistaceae Neoconidiobolus Neoconidiobolus thromboides

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;